RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 A0A1W2PPQ1 181 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 PRRT4C9JH25 899 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 SPRY1O43609 319 aaPredicted RBP13.4□□□□□ -0.26
UBR5-201ENST00000220959 C1QBP02746 253 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 RAB1BQ9H0U4 201 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 KNDC1Q76NI1 1749 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 TRIM77I1YAP6 450 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 HOXA4Q00056 320 aaPredicted RBP13.4□□□□□ -0.26
UBR5-201ENST00000220959 EMDP50402 254 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 DHRS11Q6UWP2 260 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 CCL4L1Q8NHW4 92 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 SLC22A13Q9Y226 551 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.26
UBR5-201ENST00000220959 GATCO43716 136 aaKnown RBP13.4□□□□□ -0.27
UBR5-201ENST00000220959 FZD6O60353 706 aa13.4□□□□□ -0.27
UBR5-201ENST00000220959 SPRED3Q2MJR0 410 aa13.4□□□□□ -0.27
UBR5-201ENST00000220959 Q8IYB0 196 aa13.4□□□□□ -0.27
UBR5-201ENST00000220959 NOL4LQ96MY1 436 aaPredicted RBP13.4□□□□□ -0.27
UBR5-201ENST00000220959 NUP98P52948 1817 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 APC2O95996 2303 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 ANKUB1A6NFN9 424 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 OR1C1Q15619 314 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 FZR1Q9UM11 496 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 TFAP2AP05549 437 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 RTN4IP1Q8WWV3 396 aaPredicted RBP13.39□□□□□ -0.27
UBR5-201ENST00000220959 H3BP45 60 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 CAPZBP47756 277 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 TCTN3Q6NUS6 607 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 CDC14BO60729 498 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 AQP6Q13520 282 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 LYG1Q8N1E2 194 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 NPEPL1Q8NDH3 523 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 PLPPR2Q96GM1 343 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 FOXB1Q99853 325 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 SCN9AQ15858 1988 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 OR4C5Q8NGB2 326 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 DOCK10Q96BY6 2186 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 PJVKQ0ZLH3 352 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 OR13C5Q8NGS8 318 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 CCL17Q92583 94 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 GSX2Q9BZM3 304 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 A0A0A6YYJ9 748 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 TAGLNQ01995 201 aaKnown RBP13.39□□□□□ -0.27
UBR5-201ENST00000220959 RNPS1Q15287 305 aaKnown RBP13.39□□□□□ -0.27
UBR5-201ENST00000220959 PNLIPRP3Q17RR3 467 aa13.39□□□□□ -0.27
UBR5-201ENST00000220959 PRKNO60260 465 aaPredicted RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 KRASP01116 189 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 STAC2Q6ZMT1 411 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 GALNT16Q8N428 558 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 TAAR3PQ9P1P4 343 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 IFITM5A6NNB3 132 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 CD200P41217 278 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 TMEM108Q6UXF1 575 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 FUNDC1Q8IVP5 155 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 OR52N4Q8NGI2 321 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 SLCO1C1Q9NYB5 712 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 CKAP5Q14008 2032 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 TMPRSS11DO60235 418 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 TGIF2LXQ8IUE1 241 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 ADAM11O75078 769 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 LIMS3P0CW19 117 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 LIMS4P0CW20 117 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 B3GNT9Q6UX72 402 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 ATP5SQ99766 215 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 VAMP8Q9BV40 100 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 OR5AL1P0C617 328 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 UBE2MP61081 183 aaKnown RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 COMMD1Q8N668 190 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 ALKBH3Q96Q83 286 aaPredicted RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 WSB2Q9NYS7 404 aaPredicted RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 FAHP16930 419 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 JUNBP17275 347 aaPredicted RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 GFERP55789 205 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 TRAPPC1Q9Y5R8 145 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 TO15178 435 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 PTBP3O95758 552 aaKnown RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 CD3DP04234 171 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 CEACAM3P40198 252 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 CEACAM6P40199 344 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 PRSS3P2Q8NHM4 247 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 RPS27P42677 84 aaKnown RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 SUMO3P55854 103 aaPredicted RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 FFAR4Q5NUL3 377 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 FAAP20Q6NZ36 180 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 SYS1Q8N2H4 156 aa13.38□□□□□ -0.27
UBR5-201ENST00000220959 HSD17B10Q99714 261 aaKnown RBP13.38□□□□□ -0.27
UBR5-201ENST00000220959 GYPAP02724 150 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 OR1F12Q8NHA8 337 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 NEIL1Q96FI4 390 aaPredicted RBP13.37□□□□□ -0.27
UBR5-201ENST00000220959 AP5S1Q9NUS5 200 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 FGF2P09038 288 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 PMCHP20382 165 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 SPNS3Q6ZMD2 512 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 PP6455Q8WZ26 134 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 SERPINE3A8MV23 424 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 PELI3Q8N2H9 469 aa13.37□□□□□ -0.27
UBR5-201ENST00000220959 SPEM1Q8N4L4 309 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms