RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 DNTTIP1Q9H147 329 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 RGCCQ9H4X1 137 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 UFSP2Q9NUQ7 469 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SDHAF2Q9NX18 166 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 U3KQ87 197 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 HEATR1Q9H583 2144 aaKnown RBP10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF254O75437 659 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 RFPL3SP0C7P2 107 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 FAM157BP0CG42 384 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF250P15622 560 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 MGMTP16455 207 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SLC25A1P53007 311 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ECH1Q13011 328 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 PLA2G7Q13093 441 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 IL10RAQ13651 578 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SSPNQ14714 243 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 PLEKHN1Q494U1 663 aaPredicted RBP10.69□□□□□ -0.7
CHPF2-201ENST00000035307 Q5BKY6 102 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 THEM4Q5T1C6 240 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 TMEM88Q6PEY1 159 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 C5orf46Q6UWT4 87 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 NKAIN3Q8N8D7 197 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 RRNAD1Q96FB5 475 aaKnown RBP10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
CHPF2-201ENST00000035307 C20orf24Q9BUV8 137 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 RABL2AQ9UBK7 228 aaPredicted RBP10.69□□□□□ -0.7
CHPF2-201ENST00000035307 RABL2BQ9UNT1 228 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 C5orf49A4QMS7 147 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 PMS2P2O95744 297 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 GRPP07492 148 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 UBBP0CG47 229 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 CD59P13987 128 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 RAB2AP61019 212 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SLC10A1Q14973 349 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 OR2B11Q5JQS5 317 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SLC25A30Q5SVS4 291 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ANKRD16Q6P6B7 361 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 SLC25A26Q70HW3 274 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 TTC9Q92623 222 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 MCHR2Q969V1 340 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 IER2Q9BTL4 223 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 OBP2BQ9NPH6 170 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 PCDHB16Q9NRJ7 776 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 CA10Q9NS85 328 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 DUSP13Q9UII6 198 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ICAM5Q9UMF0 924 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF175Q9Y473 711 aa10.69□□□□□ -0.7
CHPF2-201ENST00000035307 ANKUB1A6NFN9 424 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 C9orf172C9J069 976 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 RAB27BO00194 218 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 TPT1P13693 172 aaKnown RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 CLVS2Q5SYC1 327 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ZBTB37Q5TC79 503 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 CLEC9AQ6UXN8 241 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 PGAP1Q75T13 922 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 SLC43A2Q8N370 569 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 SEMA6DQ8NFY4 1073 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 OR51F2Q8NH61 342 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 INTS12Q96CB8 462 aaKnown RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ARPC5LQ9BPX5 153 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 SYT3Q9BQG1 590 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 NOTCH3Q9UM47 2321 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 A0A1B0GUH1 482 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 TRAPPC2LH3BP13 241 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 KLRC4-KLRK1H3BQV0 150 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 K7EPK0 472 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 TSPAN2O60636 221 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 EIF1BO60739 113 aaKnown RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 SNRNP70P08621 437 aaKnown RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 CELA3AP09093 270 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 CNN3Q15417 329 aaKnown RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF684Q5T5D7 378 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF774Q6NX45 483 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 C6orf201Q7Z4U5 140 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 FAM71E2Q8N5Q1 922 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 FAM181AQ8N9Y4 354 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 DUSP18Q8NEJ0 188 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 KISS1RQ969F8 398 aaPredicted RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ARL11Q969Q4 196 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 MRGPRX4Q96LA9 322 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 OXGR1Q96P68 337 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 TRIB1Q96RU8 372 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF649Q9BS31 505 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 RAB33BQ9H082 229 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 IGKV1D-42A0A075B6H8 117 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ADAP1O75689 374 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 CBR3O75828 277 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 SERPINA7P05543 415 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 UMODP07911 640 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 FGF5P12034 268 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 IDH3GP51553 393 aaPredicted RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 SOX8P57073 446 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 CYCSP99999 105 aaKnown RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ACSM1Q08AH1 577 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 RIPPLY1Q0D2K3 151 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 PCOLCEQ15113 449 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF385AQ96PM9 386 aaKnown RBP10.68□□□□□ -0.7
CHPF2-201ENST00000035307 CLCC1Q96S66 551 aa10.68□□□□□ -0.7
CHPF2-201ENST00000035307 MAGT1Q9H0U3 335 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms