RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 IGHV4-59P01825 116 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 LYNP07948 512 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 H2BFMP0C1H6 154 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4L2P0CJ85 424 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4L3P0CJ86 424 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4L4P0CJ87 422 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4L5P0CJ88 424 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4L6P0CJ89 424 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4L7P0CJ90 424 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 T-ENOLP0DO92 83 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 PAICSP22234 425 aaKnown RBP13.05□□□□□ -0.32
ERCC1-201ENST00000013807 CALB2P22676 271 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 ACKR3P25106 362 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 GYS2P54840 703 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 CDK5Q00535 292 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4L9Q6RFH8 374 aaPredicted RBP13.05□□□□□ -0.32
ERCC1-201ENST00000013807 ZNF788Q6ZQV5 615 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 VMO1Q7Z5L0 202 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 FGFRL1Q8N441 504 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 Q8N7P7 452 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 ZSCAN4Q8NAM6 433 aaPredicted RBP13.05□□□□□ -0.32
ERCC1-201ENST00000013807 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 TNFRSF14Q92956 283 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 PGAM5Q96HS1 289 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 RTL8AQ9BWD3 113 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 CHID1Q9BWS9 393 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 PAPOLGQ9BWT3 736 aaKnown RBP13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DPAGT1Q9H3H5 408 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 DUX4Q9UBX2 424 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 CMYA5Q8N3K9 4069 aa13.05□□□□□ -0.32
ERCC1-201ENST00000013807 ACOD1A6NK06 481 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 PRR23D1E9PI22 279 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-201ENST00000013807 H3BN98 237 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 CST1P01037 141 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 HMGN1P05114 100 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 PRR23D2P0DMB1 279 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-201ENST00000013807 ALOX5APP20292 161 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 CAV3P56539 151 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 PROK1P58294 105 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 ELF3P78545 371 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-201ENST00000013807 GUCA2AQ02747 115 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 SRSF4Q08170 494 aaKnown RBP13.04□□□□□ -0.32
ERCC1-201ENST00000013807 PRDX4Q13162 271 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 PDLIM3Q53GG5 364 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-201ENST00000013807 LRRC10Q5BKY1 277 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 SLC35D3Q5M8T2 416 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 DEGS2Q6QHC5 323 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 GDPGP1Q6ZNW5 385 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 TMEM179BQ7Z7N9 219 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-201ENST00000013807 ADGRG5Q8IZF4 528 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 CMTM4Q8IZR5 234 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 IQCF1Q8N6M8 205 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 FAM216BQ8N7L0 139 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 SCCPDHQ8NBX0 429 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 ANGPTL6Q8NI99 470 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 LRTOMTQ8WZ04 291 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 SEH1LQ96EE3 360 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 MED30Q96HR3 178 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 LYZL4Q96KX0 146 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 CCT8L2Q96SF2 557 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 C16orf95Q9H693 158 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 TAS2R1Q9NYW7 299 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 DNAJC27Q9NZQ0 273 aa13.04□□□□□ -0.32
ERCC1-201ENST00000013807 CAB39Q9Y376 341 aaPredicted RBP13.04□□□□□ -0.32
ERCC1-201ENST00000013807 A0A0U1RQV5 110 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 AQP12BA6NM10 295 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 SLC2A5P22732 501 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 KRTAP10-3P60369 221 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 PSMA6P60900 246 aaKnown RBP13.03□□□□□ -0.32
ERCC1-201ENST00000013807 DEFA6Q01524 100 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 GINS1Q14691 196 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 AQP12AQ8IXF9 295 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 HPSE2Q8WWQ2 592 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 PKP2Q99959 881 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 FGF23Q9GZV9 251 aaPredicted RBP13.03□□□□□ -0.32
ERCC1-201ENST00000013807 WDR13Q9H1Z4 485 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 OR51V1Q9H2C8 321 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 TNFRSF19Q9NS68 423 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 ZNRD1Q9P1U0 126 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 RNF114Q9Y508 228 aa13.03□□□□□ -0.32
ERCC1-201ENST00000013807 ZNF850A8MQ14 1090 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 M0R1W7 72 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 TIMM23O14925 209 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 SIGLEC5O15389 551 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 SELENOFO60613 162 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 TSPAN9O75954 239 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 ACAA1P09110 424 aaPredicted RBP13.02□□□□□ -0.33
ERCC1-201ENST00000013807 FBP1P09467 338 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 OSMP13725 252 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 ATP6V1B1P15313 513 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 TAF9Q16594 264 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 PLBD1Q6P4A8 553 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 THEM6Q8WUY1 208 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 CANT1Q8WVQ1 401 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 MMP27Q9H306 513 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 BRD7Q9NPI1 651 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 FAM96BQ9Y3D0 163 aa13.02□□□□□ -0.33
ERCC1-201ENST00000013807 M0QZ24 198 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms