RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RGS9O75916 674 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-213ENST00000642137 ALX3O95076 343 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 BMP4P12644 408 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 FAHP16930 419 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 ZNF20P17024 532 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 TGFBR2P37173 567 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 CRYBB2P43320 205 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 SOX2P48431 317 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 FABP5Q01469 135 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 NKPD1Q17RQ9 610 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 ZMAT1Q5H9K5 638 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 CLVS2Q5SYC1 327 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 GDPGP1Q6ZNW5 385 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 GPR141Q7Z602 305 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 CEACAM19Q7Z692 300 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 SPERTQ8NA61 448 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 OR5D14Q8NGL3 314 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 OR13C5Q8NGS8 318 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 TMEM106AQ96A25 262 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 ADAT3Q96EY9 351 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-213ENST00000642137 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 TRAF4Q9BUZ4 470 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-213ENST00000642137 PLEKHA1Q9HB21 404 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 ABCB9Q9NP78 766 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 ZDHHC8Q9ULC8 765 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 STUB1Q9UNE7 303 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 SSR3Q9UNL2 185 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 NOP16Q9Y3C1 178 aaKnown RBP10.51□□□□□ -0.73
LINC00339-213ENST00000642137 RHBDD3Q9Y3P4 386 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 PMF1-BGLAPU3KQ54 211 aa10.51□□□□□ -0.73
LINC00339-213ENST00000642137 DSCAMO60469 2012 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 A6NIN4 97 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 ZNF850A8MQ14 1090 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 M0R233 179 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 GABRPO00591 440 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 LILRA1O75019 489 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 NRASP01111 189 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 SOD3P08294 240 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 ADH4P08319 380 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 FGF9P31371 208 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-213ENST00000642137 GNALP38405 381 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 SNRPD2P62316 118 aaKnown RBP10.5□□□□□ -0.73
LINC00339-213ENST00000642137 TIMM50Q3ZCQ8 353 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 ZNF787Q6DD87 383 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 HIST2H2BCQ6DN03 193 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 C11orf71Q6IPW1 123 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 Q6ZR03 302 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 MOB3CQ70IA8 216 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 UTS2BQ765I0 119 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 BHLHE23Q8NDY6 225 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 TECTBQ96PL2 329 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 DERL3Q96Q80 235 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 HIST1H2AAQ96QV6 131 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 OR14A2Q96R54 314 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 CHST5Q9GZS9 411 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 ZCCHC4Q9H5U6 513 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 MSL2Q9HCI7 577 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 NOX4Q9NPH5 578 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 FOXJ3Q9UPW0 622 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 ADGRG4Q8IZF6 3080 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 ROS1P08922 2347 aa10.5□□□□□ -0.73
LINC00339-213ENST00000642137 ANKRD61A6NGH8 418 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 C17orf100A8MU93 164 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 PIN1P1O15428 100 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 UCHL1P09936 223 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 IGFBP3P17936 291 aaPredicted RBP10.49□□□□□ -0.73
LINC00339-213ENST00000642137 ATF1P18846 271 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 CA6P23280 308 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 GADD45AP24522 165 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 ALDH3B1P43353 468 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 PPOXP50336 477 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 ZNF81P51508 661 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 MZT1Q08AG7 82 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 PRDX4Q13162 271 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 BLMHQ13867 455 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 OR8G1Q15617 311 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 CEACAM21Q3KPI0 293 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 ZNF529Q6P280 563 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 ANKRD13BQ86YJ7 626 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 OR5A2Q8NGI9 324 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 IGFBPL1Q8WX77 278 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 FUNDC2Q9BWH2 189 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 PAPOLGQ9BWT3 736 aaKnown RBP10.49□□□□□ -0.73
LINC00339-213ENST00000642137 OR51E2Q9H255 320 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 NEK6Q9HC98 313 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 NKIRAS2Q9NYR9 191 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 LAMP3Q9UQV4 416 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 GSTK1Q9Y2Q3 226 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 LRRK2Q5S007 2527 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 ARFGEF3Q5TH69 2177 aa10.49□□□□□ -0.73
LINC00339-213ENST00000642137 TENM4Q6N022 2769 aa10.48□□□□□ -0.73
LINC00339-213ENST00000642137 USP9YO00507 2555 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-213ENST00000642137 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.48□□□□□ -0.73
LINC00339-213ENST00000642137 A0A1W2PPK0 400 aa10.48□□□□□ -0.73
LINC00339-213ENST00000642137 ZSCAN5BA6NJL1 495 aa10.48□□□□□ -0.73
LINC00339-213ENST00000642137 ANXA2P2A6NMY6 339 aa10.48□□□□□ -0.73
LINC00339-213ENST00000642137 H0YL77 283 aa10.48□□□□□ -0.73
LINC00339-213ENST00000642137 OVOL3O00110 214 aa10.48□□□□□ -0.73
LINC00339-213ENST00000642137 MLNRO43193 412 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms