RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 HLA-DPB1P04440 258 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 CCDC159P0C7I6 412 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 MTNR1AP48039 350 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 HCCSP53701 268 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 DEGS2Q6QHC5 323 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 FAM57BQ71RH2 274 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 OR51F2Q8NH61 342 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 MYCBPQ99417 103 aaPredicted RBP15.3■□□□□ 0.04
VPS72-207ENST00000640458 ZNF665Q9H7R5 613 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 NIPAL2Q9H841 368 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 GCM1Q9NP62 436 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 PLCXD1Q9NUJ7 323 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 HAO2Q9NYQ3 351 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 MRPL15Q9P015 296 aaKnown RBP15.3■□□□□ 0.04
VPS72-207ENST00000640458 NOP16Q9Y3C1 178 aaKnown RBP15.3■□□□□ 0.04
VPS72-207ENST00000640458 TMEM14AQ9Y6G1 99 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 TRRAPQ9Y4A5 3859 aa15.3■□□□□ 0.04
VPS72-207ENST00000640458 EFCAB10A6NFE3 127 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 WBP4O75554 376 aaKnown RBP15.29■□□□□ 0.04
VPS72-207ENST00000640458 MRPL3P09001 348 aaKnown RBP15.29■□□□□ 0.04
VPS72-207ENST00000640458 DDOSTP39656 456 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 HNRNPA0Q13151 305 aaKnown RBP15.29■□□□□ 0.04
VPS72-207ENST00000640458 TIGD6Q17RP2 521 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 KCTD18Q6PI47 426 aaPredicted RBP15.29■□□□□ 0.04
VPS72-207ENST00000640458 LRRN1Q6UXK5 716 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 C1orf229Q6ZS94 237 aaPredicted RBP15.29■□□□□ 0.04
VPS72-207ENST00000640458 KRT77Q7Z794 578 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 CELF2-AS1Q8N7Q2 184 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 APH1BQ8WW43 257 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 SIGLEC11Q96RL6 698 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 CNN2Q99439 309 aaKnown RBP15.29■□□□□ 0.04
VPS72-207ENST00000640458 SLC6A7Q99884 636 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 OR10A2Q9H208 303 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 ESM1Q9NQ30 184 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 ZNF319Q9P2F9 582 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 AASSQ9UDR5 926 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 MYRFQ9Y2G1 1151 aa15.29■□□□□ 0.04
VPS72-207ENST00000640458 TMEM178BH3BS89 294 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 SLC1A7O00341 560 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 GMDSO60547 372 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 FADS2O95864 444 aaKnown RBP15.28■□□□□ 0.04
VPS72-207ENST00000640458 PNPP00491 289 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 AVPP01185 164 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 IGHV2-70P01814 119 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 IGHV2-5P01817 119 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 DBTP11182 482 aaKnown RBP15.28■□□□□ 0.04
VPS72-207ENST00000640458 CA6P23280 308 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 CFL1P23528 166 aaKnown RBP15.28■□□□□ 0.04
VPS72-207ENST00000640458 EEF1B2P24534 225 aaKnown RBP15.28■□□□□ 0.04
VPS72-207ENST00000640458 CD200P41217 278 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 GATA4P43694 442 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 MMP16P51512 607 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 PSMA6P60900 246 aaKnown RBP15.28■□□□□ 0.04
VPS72-207ENST00000640458 FAM3AP98173 230 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 ROM1Q03395 351 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 FOXL1Q12952 345 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 MAB21L1Q13394 359 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 TEX29Q8N6K0 151 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 ZDHHC22Q8N966 263 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 OR56B2PQ8NGI1 322 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 ASB17Q8WXJ9 295 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 MYDGFQ969H8 173 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 RAB39BQ96DA2 213 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 RNFT2Q96EX2 444 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 REEP6Q96HR9 211 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 PGAM5Q96HS1 289 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 MNTQ99583 582 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 RGCCQ9H4X1 137 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 BRD7Q9NPI1 651 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 COPS3Q9UNS2 423 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 LRP12Q9Y561 859 aa15.28■□□□□ 0.04
VPS72-207ENST00000640458 hCG_38984A0A1B0GV85 526 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 ZNF254O75437 659 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 DCTDP32321 178 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 RBMXP38159 391 aaKnown RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 UBA52P62987 128 aaKnown RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 ZNF91Q05481 1191 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 RAB40BQ12829 278 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 OR8G1Q15617 311 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 SMN1Q16637 294 aaKnown RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 ZNF181Q2M3W8 571 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 TMEM155Q4W5P6 130 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 KLBQ86Z14 1044 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 STX19Q8N4C7 294 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 BPIFB2Q8N4F0 458 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 OR51G2Q8NGK0 314 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 ZNF420Q8TAQ5 688 aaPredicted RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 ERGIC1Q969X5 290 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 MRPL48Q96GC5 212 aaKnown RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 OR8B4Q96RC9 309 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 NR1H4Q96RI1 486 aaPredicted RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 GAL3ST1Q99999 423 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 MROQ9BYG7 248 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 ADGRL4Q9HBW9 690 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 AMBNQ9NP70 447 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 CHCHD3Q9NX63 227 aaKnown RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 UBAP1Q9NZ09 502 aa15.27■□□□□ 0.04
VPS72-207ENST00000640458 CNOT2Q9NZN8 540 aaKnown RBP15.27■□□□□ 0.04
VPS72-207ENST00000640458 TRAV20A0A0B4J274 112 aa15.26■□□□□ 0.03
VPS72-207ENST00000640458 ISPDA4D126 451 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms