RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	SNCA	P37840	140 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	RABIF	P47224	123 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	PCP4	P48539	62 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	ANKRD55	Q3KP44	614 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	GKN2	Q86XP6	184 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	COMMD1	Q8N668	190 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	KTI12	Q96EK9	354 aa	Predicted RBP	12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	EIF5A2	Q9GZV4	153 aa	Known RBP	12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	PARP12	Q9H0J9	701 aa	Known RBP	12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	CNTD2	Q9H8S5	307 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	SLC17A4	Q9Y2C5	497 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	MEMO1	Q9Y316	297 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	LRP12	Q9Y561	859 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	FOXS1	O43638	330 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	NR2C1	P13056	603 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	HIST1H1B	P16401	226 aa	Known RBP	12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	EGR4	Q05215	589 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	MIDN	Q504T8	468 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	DMRTC1	Q5HYR2	192 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	CLEC9A	Q6UXN8	241 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	AMDHD2	Q9Y303	409 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	JTB	O76095	146 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	CDX1	P47902	265 aa	Predicted RBP	12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	UNC119	Q13432	240 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	CD300LF	Q8TDQ1	290 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	EMC9	Q9Y3B6	208 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	POLE	Q07864	2286 aa		12.16	□□□□□ -0.46
KCNMA1-238	ENST00000638514	SZT2	Q5T011	3432 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	IGHV3-20	A0A0C4DH32	117 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	HRK	O00198	91 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	CTSB	P07858	339 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	PI3	P19957	117 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	LSM6	P62312	80 aa	Known RBP	12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	RAB1A	P62820	205 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	HIST2H3A	Q71DI3	136 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	BCORP1	Q8N888	145 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	OR10D4P	Q8NGN7	298 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	C8orf44	Q96CB5	159 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	ABHD6	Q9BV23	337 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	SCGN	O76038	276 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	GAPDH	P04406	335 aa	Known RBP	12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	KIR2DS3	Q14952	304 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	OR2A2	Q6IF42	318 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	MARCH3	Q86UD3	253 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	FLVCR1-AS1	Q8TAF5	88 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	SCGB3A2	Q96PL1	93 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	TBL1XR1	Q9BZK7	514 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	MRPL22	Q9NWU5	206 aa	Known RBP	12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	GAR1	Q9NY12	217 aa	Known RBP	12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	FBXL17	Q9UF56	701 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	RHBDD3	Q9Y3P4	386 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	EPOP	A6NHQ4	379 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	NME2P1	O60361	137 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	LMX1B	O60663	402 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	SFTPB	P07988	381 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	IL12B	P29460	328 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	RPL12	P30050	165 aa	Known RBP	12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	CLDN6	P56747	220 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	ZNF616	Q08AN1	781 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	NFATC4	Q14934	902 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	LYPD6	Q86Y78	171 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	ARL6IP6	Q8N6S5	226 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	UBAC2	Q8NBM4	344 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514		R4GMQ9	66 aa		12.15	□□□□□ -0.46
KCNMA1-238	ENST00000638514		K7EPK0	472 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514		K7EQS6	105 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZNF264	O43296	627 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	TNFSF14	O43557	240 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SLC16A7	O60669	478 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RPS10	P46783	165 aa	Known RBP	12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SUPT4H1	P63272	117 aa	Known RBP	12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OPN5	Q6U736	354 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	TMEM92	Q6UXU6	159 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	FAM71E2	Q8N5Q1	922 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	TAAR8	Q969N4	342 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SPEG	Q15772	3267 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	BPNT1	O95861	308 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	G0S2	P27469	103 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	FCGR2C	P31995	323 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	NDUFA6	P56556	154 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RAB38	P57729	211 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	FAM3A	P98173	230 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	IL15RA	Q13261	267 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZNF239	Q16600	458 aa	Known RBP	12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	METTL21A	Q8WXB1	218 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	C2orf88	Q9BSF0	95 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SMIM3	Q9BZL3	60 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	KCNJ16	Q9NPI9	418 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZDHHC8	Q9ULC8	765 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	TMEM150C	B9EJG8	249 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR2C1	O95371	312 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	VSIG8	P0DPA2	414 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	FPR2	P25090	351 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RSU1	Q15404	277 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	USF2	Q15853	346 aa	Predicted RBP	12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ANKRD39	Q53RE8	183 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	PDZD11	Q5EBL8	140 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR2I1P	Q8NGU4	316 aa		12.14	□□□□□ -0.47

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