RNA–Protein interactions for RNA: ENST00000637050.1

CLN3-254, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 1,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-254ENST00000637050 SORCS2Q96PQ0 1159 aa15.88■□□□□ 0.13
CLN3-254ENST00000637050 SOSTQ9BQB4 213 aa15.88■□□□□ 0.13
CLN3-254ENST00000637050 ETV7Q9Y603 341 aa15.88■□□□□ 0.13
CLN3-254ENST00000637050 ZNF816-ZNF321PA0A0X1KG74 233 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 ATXN7O15265 892 aaPredicted RBP15.87■□□□□ 0.13
CLN3-254ENST00000637050 GMDSO60547 372 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 PPP1CBP62140 327 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 P2RY14Q15391 338 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 CLVS2Q5SYC1 327 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 OR56B2PQ8NGI1 322 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 UBASH3BQ8TF42 649 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 FAM3DQ96BQ1 224 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 NKX3-1Q99801 234 aaPredicted RBP15.87■□□□□ 0.13
CLN3-254ENST00000637050 OR51B6Q9H340 312 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 CNTD2Q9H8S5 307 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 POLEQ07864 2286 aa15.87■□□□□ 0.13
CLN3-254ENST00000637050 IGHV2OR16-5A0A0B4J2B6 119 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 FABP12A6NFH5 140 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 FAM25AB3EWG3 89 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 FAM25CB3EWG5 89 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 FAM25GB3EWG6 89 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 MAGEB3O15480 346 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 HCKP08631 526 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 FAM157BP0CG42 384 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 CHRNB4P30926 498 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 ZNF93P35789 620 aaPredicted RBP15.86■□□□□ 0.13
CLN3-254ENST00000637050 ADORA2A-AS1P86434 159 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 UBE2NLQ5JXB2 153 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 METAP1DQ6UB28 335 aaPredicted RBP15.86■□□□□ 0.13
CLN3-254ENST00000637050 SEZ6L2Q6UXD5 910 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 FBXW12Q6X9E4 464 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 C22orf34Q6ZV56 151 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 OR51D1Q8NGF3 324 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 OR4D6Q8NGJ1 314 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 SLC25A38Q96DW6 304 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 GPR173Q9NS66 373 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 NPAP1Q9NZP6 1156 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 RP1L1Q8IWN7 2480 aaPredicted RBP15.86■□□□□ 0.13
CLN3-254ENST00000637050 GGT3PA6NGU5 568 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 NRASP01111 189 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 AZGP1P25311 298 aaKnown RBP15.86■□□□□ 0.13
CLN3-254ENST00000637050 ASCL1P50553 236 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 ZNF83P51522 516 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 NAAAQ02083 359 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 RIN1Q13671 783 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 ZNF79Q15937 498 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 CRIP3Q6Q6R5 217 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 RNF144BQ7Z419 303 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 FJX1Q86VR8 437 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 CSNK2A3Q8NEV1 391 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 PIGTQ969N2 578 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 SPSB1Q96BD6 273 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 SPACA5Q96QH8 159 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 PALMDQ9NP74 551 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 KCNN3Q9UGI6 736 aa15.86■□□□□ 0.13
CLN3-254ENST00000637050 LOC100289279A0A1B0GTE1 492 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 CD300LBA8K4G0 201 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 OCMP0CE72 109 aaPredicted RBP15.85■□□□□ 0.13
CLN3-254ENST00000637050 TUBG1P23258 451 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 CALCRP30988 508 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 POU3F4P49335 361 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 CNN3Q15417 329 aaKnown RBP15.85■□□□□ 0.13
CLN3-254ENST00000637050 C2orf76Q3KRA6 126 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 FBXL19-AS1Q494R0 122 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 DMRTC1Q5HYR2 192 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 FAM131AQ6UXB0 335 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 UNQ6126/PRO20091Q6UXV3 157 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 SSX8Q7RTT4 187 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 PPP1R14BQ96C90 147 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 TECTBQ96PL2 329 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 ABCG5Q9H222 651 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 TUBG2Q9NRH3 451 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 EXTL2Q9UBQ6 330 aa15.85■□□□□ 0.13
CLN3-254ENST00000637050 TPRP12270 2363 aaKnown RBP15.84■□□□□ 0.13
CLN3-254ENST00000637050 M0R1B8 84 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 CST4P01036 141 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 PRKACBP22694 351 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 PTBP1P26599 531 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLN3-254ENST00000637050 RAD52P43351 418 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 CAPZA1P52907 286 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 KISS1Q15726 138 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 SPATA46Q5T0L3 261 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 CMTM4Q8IZR5 234 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 OR4M1Q8NGD0 313 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 OR1J1Q8NGS3 322 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 SLC25A40Q8TBP6 338 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 NPRL2Q8WTW4 380 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 PIGCQ92535 297 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 CCDC120Q96HB5 630 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 SDHCQ99643 169 aaPredicted RBP15.84■□□□□ 0.13
CLN3-254ENST00000637050 OR2J1Q9GZK6 312 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 PPP1R3EQ9H7J1 279 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 COQ3Q9NZJ6 369 aa15.84■□□□□ 0.13
CLN3-254ENST00000637050 A0A1B0GUH1 482 aa15.83■□□□□ 0.13
CLN3-254ENST00000637050 LDLRAD4O15165 306 aa15.83■□□□□ 0.13
CLN3-254ENST00000637050 ARSBP15848 533 aa15.83■□□□□ 0.13
CLN3-254ENST00000637050 TALDO1P37837 337 aa15.83■□□□□ 0.13
CLN3-254ENST00000637050 ART1P52961 327 aa15.83■□□□□ 0.13
CLN3-254ENST00000637050 ERVS71-1P61550 626 aa15.83■□□□□ 0.13
CLN3-254ENST00000637050 XKRXQ6PP77 449 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms