RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 R4GMQ9 66 aa12.78□□□□□ -0.36
NEDD4L-238ENST00000635997 ZFC3H1O60293 1989 aaKnown RBP12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 ARRDC5A6NEK1 342 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 C4orf51C9J302 202 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 J3QKU1 62 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 TAS2R31P59538 309 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 CDK5Q00535 292 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 ZNF141Q15928 474 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 ELFN2Q5R3F8 820 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 C12orf73Q69YU5 71 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 PHYHIPQ92561 330 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 HRASLSQ9HDD0 168 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 MIA3Q5JRA6 1907 aa12.77□□□□□ -0.36
NEDD4L-238ENST00000635997 MEIKINA0A087WXM9 373 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 ERVH48-1M5A8F1 160 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 PHF1O43189 567 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNHIT1O43257 154 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 PRAF2O60831 178 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 HMGA2P52926 109 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 LIMK1P53667 647 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 RAC1P63000 192 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 OR2T2Q6IF00 324 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 CMTM4Q8IZR5 234 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 NOXO1Q8NFA2 376 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 TSPAN32Q96QS1 320 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 BCO1Q9HAY6 547 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 ARPC3O15145 178 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 ANXA7P20073 488 aaKnown RBP12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 OR8B4Q96RC9 309 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 PTDSS2Q9BVG9 487 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 AKIRIN1Q9H9L7 192 aaPredicted RBP12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 GCM1Q9NP62 436 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 CES1P1Q9UKY3 287 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 IGF2RP11717 2491 aa12.77□□□□□ -0.37
NEDD4L-238ENST00000635997 TRIM64BA6NI03 449 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 IFNA4P05014 189 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 TRAPPC2P0DI81 140 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 TRAPPC2BP0DI82 140 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 TAS2R20P59543 309 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 C17orf47Q8NEP4 570 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 NUBPLQ8TB37 319 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 MCHR2Q969V1 340 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 SGK3Q96BR1 496 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 C12orf57Q99622 126 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 FGF20Q9NP95 211 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 A3GALT2U3KPV4 340 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 GNB3P16520 340 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 RFX2P48378 723 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 PRSS53Q2L4Q9 553 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 LSRQ86X29 649 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 C20orf196Q8IYI0 205 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 FDCSPQ8NFU4 85 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 TMEM171Q8WVE6 324 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 GPA33Q99795 319 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 SLX1AQ9BQ83 275 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 UBTD1Q9HAC8 227 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 PILRAQ9UKJ1 303 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 SLC22A23A1A5C7 686 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 SPRY3O43610 288 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 ATG12O94817 140 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 FOSL1P15407 271 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 ZFP36L2P47974 494 aaKnown RBP12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 CSRP3P50461 194 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 WDR38Q5JTN6 314 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 CNTNAP3Q9BZ76 1288 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 COPS3Q9UNS2 423 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 BTBD17A6NE02 478 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 RAF1P04049 648 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 GLRA1P23415 457 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 SNCAP37840 140 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNF136P52737 540 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 EGR3Q06889 387 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 BAMBIQ13145 260 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 HES1Q14469 280 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 ZNF718Q3SXZ3 478 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 M1APQ8TC57 530 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 ABHD3Q8WU67 409 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 KLK11Q9UBX7 282 aa12.76□□□□□ -0.37
NEDD4L-238ENST00000635997 ANK1P16157 1881 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 MED19A0JLT2 244 aaPredicted RBP12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 CDC14BO60729 498 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 CHRM2P08172 466 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 AKR1C8PQ5T2L2 129 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 S100PBPQ96BU1 408 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 ASF1BQ9NVP2 202 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 DOCK9Q9BZ29 2069 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 C17orf51A8MQB3 221 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 ARR3P36575 388 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 RTL8AQ9BWD3 113 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 AUNIPQ9H7T9 357 aa12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.37
NEDD4L-238ENST00000635997 HSPB2A8KAH6 182 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms