RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 OR52N4Q8NGI2 321 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 OR4C3Q8NH37 302 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CMBLQ96DG6 245 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 GNRHR2Q96P88 292 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 DIRC2Q96SL1 478 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ZBP1Q9H171 429 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 PLEKHA2Q9HB19 425 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 BET1LQ9NYM9 111 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 PRRC2BQ5JSZ5 2229 aaKnown RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF318Q5VUA4 2279 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TRBV23-1A0A0A0MS06 115 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 A0A1W2PNR3 127 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CXCL13O43927 109 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 COX7A1P24310 79 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 OR3A4PP47883 348 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 FOXA1P55317 472 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 GNG3P63215 75 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 HLXQ14774 488 aaPredicted RBP5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ADIPOQQ15848 244 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SLC35E4Q6ICL7 350 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 CLEC2AQ6UVW9 174 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ACOT7LQ6ZUV0 252 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 FAM122BQ7Z309 247 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 LYG1Q8N1E2 194 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 SPEM1Q8N4L4 309 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 TMEM171Q8WVE6 324 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 C8orf44Q96CB5 159 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ADGRG7Q96K78 797 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 KCNK15Q9H427 330 aa5.03□□□□□ -1.6
SCN1A-209ENST00000635750 ECM29Q5VYK3 1845 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SVILO95425 2214 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LOC107986453A0A1B0GWG9 222 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CDRT15L2A8MXV6 281 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 RPS25P62851 125 aaKnown RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LDLRAD1Q5T700 205 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CD276Q5ZPR3 534 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM81Q6P7N7 255 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PET117Q6UWS5 81 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SIAH3Q8IW03 269 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM123Q8N131 208 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ANKRD53Q8N9V6 530 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 GABRG3Q99928 467 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 VAMP8Q9BV40 100 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 C1QTNF3Q9BXJ4 246 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 WDR13Q9H1Z4 485 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 UBQLN3Q9H347 655 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 RANGRFQ9HD47 186 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 DOT1LQ8TEK3 1739 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 M0R1X1 148 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LRP3O75074 770 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ST6GAL1P15907 406 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TGFBR1P36897 503 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 GNG4P50150 75 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 YBX1P67809 324 aaKnown RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CEBPEQ15744 281 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LEXMQ3ZCV2 418 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 FNDC7Q5VTL7 733 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CORO6Q6QEF8 472 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PELI3Q8N2H9 469 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LSMEM1Q8N8F7 131 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 C5orf17Q8NAS9 161 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF511Q8NB15 262 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR1B1Q8NGR6 318 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 C7orf43Q8WVR3 580 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 FAAP24Q9BTP7 215 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 C6orf106Q9H6K1 298 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF71Q9NQZ8 489 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR6C3Q9NZP0 311 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 COL2A1P02458 1487 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TOPAZ1Q8N9V7 1692 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 HEATR5BQ9P2D3 2071 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 KRASP01116 189 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ATP1B1P05026 303 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 MMP7P09237 267 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PJVKQ0ZLH3 352 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SSPNQ14714 243 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SPCS2Q15005 226 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OTUD1Q5VV17 481 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ABHD17CQ6PCB6 329 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 UNQ9370/PRO34162Q6UXP9 181 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR51S1Q8NGJ8 323 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 GPBAR1Q8TDU6 330 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TM4SF19Q96DZ7 209 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PCED1AQ9H1Q7 454 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 MBD1Q9UIS9 605 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 GFYI3L273 518 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 M0R3E3 92 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 MASP2O00187 686 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CD1BP29016 333 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 EMX1Q04741 257 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SLC25A26Q70HW3 274 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TMUB2Q71RG4 321 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR5A2Q8NGI9 324 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 DTD1Q8TEA8 209 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 APOBEC4Q8WW27 367 aaKnown RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PERPQ96FX8 193 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 Q96M85 177 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF426Q9BUY5 554 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 GSX1Q9H4S2 264 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CCL26Q9Y258 94 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms