RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 HEXA-AS1Q9H8Q6 139 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 FN3KRPQ9HA64 309 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CXorf21Q9HAI6 301 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PRTFDC1Q9NRG1 225 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 C20orf96Q9NUD7 363 aaPredicted RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 UFSP2Q9NUQ7 469 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 IMPAD1Q9NX62 359 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 MTRF1LQ9UGC7 380 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF221Q9UK13 617 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 PTBP2Q9UKA9 531 aaKnown RBP1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 CES1P1Q9UKY3 287 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC22A14Q9Y267 594 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ASB4Q9Y574 426 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 WIF1Q9Y5W5 379 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 RYR3Q15413 4870 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 MALRD1Q5VYJ5 2156 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 ARFGEF3Q5TH69 2177 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 IGLV3-32A0A0A0MS00 114 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM240BA0A1B0GVZ2 78 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 XKRY2A2RUG3 117 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TUBAL3A6NHL2 446 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PCP4L1A6NKN8 68 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 USP27XA6NNY8 438 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 A8MUA0 341 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 H0Y8G0 127 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 H0YIV9 168 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 GOLGA8MH3BSY2 632 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PSMD12O00232 456 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PGRMC1O00264 195 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RTL8CO15255 209 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF208O43345 1280 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 EEDO75530 441 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 SEMA3DO95025 777 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 LRATO95237 230 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TGM6O95932 706 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ACTL6AO96019 429 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 KRT14P02533 472 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 P04436 131 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 CRHP06850 196 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 UQCRHP07919 91 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC35E2BP0CK96 405 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 CT45A10P0DMU9 189 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 SERPINB1P30740 379 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 UGT2B10P36537 528 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 HPCAL1P37235 193 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TAGLN2P37802 199 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 MAGEA12P43365 314 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ALDH3B2P48448 385 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ARHGDIBP52566 201 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 FBXW4P57775 412 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RPL23AP62750 156 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RPL8P62917 257 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 BTN3A2P78410 334 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PLGLB1Q02325 96 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PUDPQ08623 228 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 CD300CQ08708 224 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 FGL1Q08830 312 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ASPHQ12797 758 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RAB40BQ12829 278 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF154Q13106 437 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 IL18R1Q13478 541 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 DOC2AQ14183 400 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TRIP13Q15645 432 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 EIPR1Q53HC9 387 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 NHLRC3Q5JS37 347 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PRAMEF20Q5VT98 475 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 KHDRBS2Q5VWX1 349 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 MEDAGQ5VYS4 303 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC22A10Q63ZE4 541 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TIGD3Q6B0B8 471 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TRIM40Q6P9F5 258 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 CCDC137Q6PK04 289 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 CCBE1Q6UXH8 406 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 NPSR1Q6W5P4 371 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 MOB3BQ86TA1 216 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 UBQLNLQ8IYU4 475 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 Q8N377 158 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RNF175Q8N4F7 328 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 OTUD6BQ8N6M0 293 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM83FQ8NEG4 500 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 STXBP6Q8NFX7 210 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 OR5L2Q8NGL0 311 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 OR5D13Q8NGL4 314 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 OR4Q3Q8NH05 313 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 OR1F12Q8NHA8 337 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC22A8Q8TCC7 542 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ACTRT1Q8TDG2 376 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 MAIP1Q8WWC4 291 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 LRRC39Q96DD0 335 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 STARD4Q96DR4 205 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PELI1Q96FA3 418 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TMEM80Q96HE8 168 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TPD52L3Q96J77 140 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 MS4A14Q96JA4 679 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF681Q96N22 645 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 CITED1Q99966 193 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 CCDC77Q9BR77 488 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PELOQ9BRX2 385 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 DOHHQ9BU89 302 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 EFCAB11Q9BUY7 163 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms