RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 UPB1Q9UBR1 384 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 ZNF175Q9Y473 711 aa19.24■□□□□ 0.67
PNKP-220ENST00000627232 FAM172BPA6NC97 362 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 SNRPGP15A8MWD9 76 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 RAB3DO95716 219 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 IGHV3-9P01782 118 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 GSTP1P09211 210 aaKnown RBP19.23■□□□□ 0.67
PNKP-220ENST00000627232 COX5BP10606 129 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 ANXA3P12429 323 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 PTGFRP43088 359 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 IFITM2Q01629 132 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 FAPQ12884 760 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 CDK10Q15131 360 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 PABPC1L2AQ5JQF8 200 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 FJX1Q86VR8 437 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 ZNF584Q8IVC4 421 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 BEST4Q8NFU0 473 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 SPSB1Q96BD6 273 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 GINS4Q9BRT9 223 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 PRDM14Q9GZV8 571 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 CST11Q9H112 138 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 IRF2BPLQ9H1B7 796 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 SPRR3Q9UBC9 169 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 KLK13Q9UKR3 277 aa19.23■□□□□ 0.67
PNKP-220ENST00000627232 ZNF736B4DX44 427 aaPredicted RBP19.22■□□□□ 0.67
PNKP-220ENST00000627232 TM4SF5O14894 197 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 RGS13O14921 159 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 XRCC2O43543 280 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 SSNA1O43805 119 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 MPIG6BO95866 241 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 HPXP02790 462 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 RAD52P43351 418 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 TNK1Q13470 666 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 C3AR1Q16581 482 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 PLXDC2Q6UX71 529 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 TMEM104Q8NE00 496 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 FDCSPQ8NFU4 85 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 OR56B1Q8NGI3 324 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 OR51S1Q8NGJ8 323 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 CPNE2Q96FN4 548 aaPredicted RBP19.22■□□□□ 0.67
PNKP-220ENST00000627232 ZMAT3Q9HA38 289 aaKnown RBP19.22■□□□□ 0.67
PNKP-220ENST00000627232 BEX1Q9HBH7 125 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 WDFY3Q8IZQ1 3526 aa19.22■□□□□ 0.67
PNKP-220ENST00000627232 MEIKINA0A087WXM9 373 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 PYCARD-AS1I3L0S3 204 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 FCGR2AP12318 317 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 WT1P19544 449 aaPredicted RBP19.21■□□□□ 0.67
PNKP-220ENST00000627232 MEF2DQ14814 521 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 CNN3Q15417 329 aaKnown RBP19.21■□□□□ 0.67
PNKP-220ENST00000627232 TRAPPC6BQ86SZ2 158 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 OR8S1Q8NH09 359 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 OR2AE1Q8NHA4 323 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 DVL3Q92997 716 aaPredicted RBP19.21■□□□□ 0.67
PNKP-220ENST00000627232 CMBLQ96DG6 245 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 HYLS1Q96M11 299 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 C1QTNF5Q9BXJ0 243 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 SELENOIQ9C0D9 397 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 PTTG3PQ9NZH4 202 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 ZNF222Q9UK12 451 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 ELF5Q9UKW6 265 aaPredicted RBP19.21■□□□□ 0.67
PNKP-220ENST00000627232 ING4Q9UNL4 249 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 ARHGAP21Q5T5U3 1957 aa19.21■□□□□ 0.67
PNKP-220ENST00000627232 A0A0A6YYD4 124 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 ZNF891A8MT65 544 aaPredicted RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 IGHG3P01860 377 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 PRKACBP22694 351 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 ACKR3P25106 362 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 RPS27AP62979 156 aaKnown RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 RTP5Q14D33 572 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 PNLIPRP3Q17RR3 467 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 TMEM42Q69YG0 159 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 SEZ6L2Q6UXD5 910 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 SLC36A1Q7Z2H8 476 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 FAM89BQ8N5H3 189 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 ZFAND1Q8TCF1 268 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 SPSB4Q96A44 273 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 NPTNQ9Y639 398 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 ZNF407Q9C0G0 2248 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 hCG_38984A0A1B0GV85 526 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 CRTAPO75718 401 aaPredicted RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 ANXA7P20073 488 aaKnown RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 SDHBP21912 280 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 MPZP25189 248 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 NOVA1P51513 510 aaKnown RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 ZBTB37Q5TC79 503 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 ZNF626Q68DY1 528 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 COLCA1Q6ZS62 124 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 NUFIP2Q7Z417 695 aaKnown RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 DPPA2Q7Z7J5 298 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 SPICQ8N5J4 248 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 STEAP2Q8NFT2 490 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 TNFAIP8L1Q8WVP5 186 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 RAB3CQ96E17 227 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 SLC25A21Q9BQT8 299 aaPredicted RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 NICN1Q9BSH3 213 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 RANBP3Q9H6Z4 567 aaPredicted RBP19.2■□□□□ 0.66
PNKP-220ENST00000627232 B3GNT2Q9NY97 397 aa19.2■□□□□ 0.66
PNKP-220ENST00000627232 A0A0C4DFX4 3053 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 TRAV17A0A0B4J275 112 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 SLC22A20A6NK97 555 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms