RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 PLEKHG7Q6ZR37 379 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 KRT74Q7RTS7 529 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 GALNT4Q8N4A0 578 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 RFLNBQ8N5W9 214 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 YIPF7Q8N8F6 280 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 RHOXF1Q8NHV9 184 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 PIGCQ92535 297 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 HIST1H2AAQ96QV6 131 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 TBX5Q99593 518 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 MICU1Q9BPX6 476 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 PAPOLGQ9BWT3 736 aaKnown RBP14.06□□□□□ -0.16
UBE3D-208ENST00000626828 MOB1AQ9H8S9 216 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 C8orf4Q9NR00 106 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 MIOXQ9UGB7 285 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 SNX5Q9Y5X3 404 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 R4GMQ9 66 aa14.06□□□□□ -0.16
UBE3D-208ENST00000626828 ANK3Q12955 4377 aaKnown RBP14.05□□□□□ -0.16
UBE3D-208ENST00000626828 LOC110117498-PIK3R3F6TDL0 507 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 SRSF10O75494 262 aaKnown RBP14.05□□□□□ -0.16
UBE3D-208ENST00000626828 MTRF1O75570 445 aaKnown RBP14.05□□□□□ -0.16
UBE3D-208ENST00000626828 ZNF205O95201 554 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 WNT2P09544 360 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 ACKR3P25106 362 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 RIPPLY1Q0D2K3 151 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 FAHD2BQ6P2I3 314 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-208ENST00000626828 KCTD20Q7Z5Y7 419 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 ELMOD2Q8IZ81 293 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 ZNF555Q8NEP9 628 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 OR51E1Q8TCB6 317 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 DVL3Q92997 716 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-208ENST00000626828 PPP1R14AQ96A00 147 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 RNFT2Q96EX2 444 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 FAHD2AQ96GK7 314 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 G6PC2Q9NQR9 355 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 GPR84Q9NQS5 396 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 C1orf123Q9NWV4 160 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 SMPD3Q9NY59 655 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-208ENST00000626828 OR52A1Q9UKL2 312 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 GTF2A1LQ9UNN4 478 aa14.05□□□□□ -0.16
UBE3D-208ENST00000626828 A6NLC8 198 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 ZNF850A8MQ14 1090 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 APOL3O95236 402 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 IGLV3-1P01715 115 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 TTRP02766 147 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 SRD5A1P18405 259 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 GABRB1P18505 474 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 GATA3P23771 443 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 PRDX4Q13162 271 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 KCNJ8Q15842 424 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 ZNF684Q5T5D7 378 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 BCL2L15Q5TBC7 163 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 LIPNQ5VXI9 398 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 ZNF771Q7L3S4 317 aaPredicted RBP14.04□□□□□ -0.16
UBE3D-208ENST00000626828 SSX6Q7RTT6 188 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 THAP5Q7Z6K1 395 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 COMMD2Q86X83 199 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 PRIMA1Q86XR5 153 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 SEMA6DQ8NFY4 1073 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 OR1M1Q8NGA1 313 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 ITPKCQ96DU7 683 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 MYCBPQ99417 103 aaPredicted RBP14.04□□□□□ -0.16
UBE3D-208ENST00000626828 TMEM246Q9BRR3 403 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 RNPEPL1Q9HAU8 725 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 TRIM36Q9NQ86 728 aa14.04□□□□□ -0.16
UBE3D-208ENST00000626828 PPIAL4CA0A0B4J2A2 164 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ZNF816-ZNF321PA0A0X1KG74 233 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 DAPL1A0PJW8 107 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 CEACAM18A8MTB9 384 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ANKRD65E5RJM6 399 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 F5H0A9 414 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-208ENST00000626828 RPP14O95059 124 aaKnown RBP14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ACTC1P68032 377 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ACTA1P68133 377 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 MFGE8Q08431 387 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-208ENST00000626828 RCN1Q15293 331 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 LRRC36Q1X8D7 754 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ZNF404Q494X3 552 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 FAM201AQ5SY85 155 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ZBTB37Q5TC79 503 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 C11orf53Q8IXP5 236 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ENTHD1Q8IYW4 607 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 TEX29Q8N6K0 151 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 PACRGLQ8N7B6 248 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 OR5P3Q8WZ94 311 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 RNF170Q96K19 258 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 FAM71F1Q96KD3 344 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-208ENST00000626828 RTL8AQ9BWD3 113 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 PPP1R3EQ9H7J1 279 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 AASSQ9UDR5 926 aa14.03□□□□□ -0.16
UBE3D-208ENST00000626828 EXOGQ9Y2C4 368 aaKnown RBP14.03□□□□□ -0.16
UBE3D-208ENST00000626828 POLR3KQ9Y2Y1 108 aaPredicted RBP14.03□□□□□ -0.16
UBE3D-208ENST00000626828 ATRQ13535 2644 aa14.02□□□□□ -0.16
UBE3D-208ENST00000626828 TRAV38-1A0A0B4J264 116 aa14.02□□□□□ -0.17
UBE3D-208ENST00000626828 A0A0G2JMP0 313 aa14.02□□□□□ -0.17
UBE3D-208ENST00000626828 A0A0X1KG70 313 aa14.02□□□□□ -0.17
UBE3D-208ENST00000626828 hCG_1807616A0A1W2PRN6 198 aa14.02□□□□□ -0.17
UBE3D-208ENST00000626828 TMEM210A6NLX4 147 aa14.02□□□□□ -0.17
UBE3D-208ENST00000626828 J3QLI3 93 aa14.02□□□□□ -0.17
UBE3D-208ENST00000626828 J3QRE1 110 aa14.02□□□□□ -0.17
UBE3D-208ENST00000626828 LGALS8O00214 317 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms