RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 SLC38A1Q9H2H9 487 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 HSPB11Q9Y547 144 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 KRBA1A5PL33 1030 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 ACKR3P25106 362 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 PCSK6P29122 969 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 TGIF2LYQ8IUE0 185 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 TGIF2LXQ8IUE1 241 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 OR1L1Q8NH94 360 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 OLIG1Q8TAK6 271 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 DDOQ99489 341 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 CITO14578 2027 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 J3QKU1 62 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 TBX19O60806 448 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 NKX2-1P43699 371 aaPredicted RBP9.92□□□□□ -0.82
VPS8-227ENST00000625842 PRDX4Q13162 271 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 SIRT5Q9NXA8 310 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 RAXQ9Y2V3 346 aa9.92□□□□□ -0.82
VPS8-227ENST00000625842 RAB27BO00194 218 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 GMDSO60547 372 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 CLDN14O95500 239 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 SPI1P17947 270 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 FOXO1Q12778 655 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 TESK1Q15569 626 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 GUCA2BQ16661 112 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 ZNF260Q3ZCT1 412 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 BPIFCQ8NFQ6 507 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 BEST4Q8NFU0 473 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 A0A0A6YYD5 115 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 ZNF705EA8MWA4 302 aaPredicted RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 NUPL2O15504 423 aaKnown RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 ST8SIA3O43173 380 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 ACOT6Q3I5F7 207 aaPredicted RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 HSD3B7Q9H2F3 369 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 SERPINE3A8MV23 424 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 SDCBPO00560 298 aaPredicted RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 LYRM1O43325 122 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 IL5P05113 134 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 DUSP1P28562 367 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 CDK5R2Q13319 367 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 OR5I1Q13606 314 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 TBCEQ15813 527 aaPredicted RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 CXorf66Q5JRM2 361 aaPredicted RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 C17orf47Q8NEP4 570 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 OR4X2Q8NGF9 303 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 OR6X1Q8NH79 312 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 PCNPQ8WW12 178 aaKnown RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 GIMAP1Q8WWP7 306 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 DIMT1Q9UNQ2 313 aaKnown RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 COL22A1Q8NFW1 1626 aaPredicted RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 IGHV3-64DA0A0J9YX35 117 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 ZNF32P17041 273 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 CA6P23280 308 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 GPM6AP51674 278 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 RPS25P62851 125 aaKnown RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 EBPQ15125 230 aaKnown RBP9.91□□□□□ -0.82
VPS8-227ENST00000625842 SLC9A3R2Q15599 337 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 SUMF2Q8NBJ7 301 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 SLA2Q9H6Q3 261 aa9.91□□□□□ -0.82
VPS8-227ENST00000625842 CALCBP10092 127 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 TGM1P22735 817 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 PCBP3P57721 371 aaKnown RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 DOC2BQ14184 412 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 ITPKCQ96DU7 683 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 THAP7Q9BT49 309 aaPredicted RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 B9D1Q9UPM9 204 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 MITFO75030 526 aaPredicted RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 CA11O75493 328 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 MRPL19P49406 292 aaKnown RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 ZNF674Q2M3X9 581 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 HYLS1Q96M11 299 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 HMGN4O00479 90 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 CD96P40200 585 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 ZNF121P58317 390 aaPredicted RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 MRPS34P82930 218 aaKnown RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 TAGLNQ01995 201 aaKnown RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 TBRG1Q3YBR2 411 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 OTUD1Q5VV17 481 aaPredicted RBP9.9□□□□□ -0.82
VPS8-227ENST00000625842 ZNF691Q5VV52 312 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 TRNP1Q6NT89 227 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 CNIH2Q6PI25 160 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 IDO2Q6ZQW0 420 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 OR4C13Q8NGP0 309 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 DPH3Q96FX2 82 aa9.9□□□□□ -0.82
VPS8-227ENST00000625842 DNAJC13O75165 2243 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 MYH10P35580 1976 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 A0A1W2PQF6 199 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 C3orf80F5H4A9 247 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 K7ESF4 209 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 PMS2P2O95744 297 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 SLC17A1Q14916 467 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 GABRA6Q16445 453 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 FAM106AQ4KMX7 169 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 CENPVQ7Z7K6 275 aaPredicted RBP9.9□□□□□ -0.83
VPS8-227ENST00000625842 SLC7A6Q92536 515 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 TEAD3Q99594 435 aa9.9□□□□□ -0.83
VPS8-227ENST00000625842 GASTP01350 101 aa9.89□□□□□ -0.83
VPS8-227ENST00000625842 IGHV4-34P06331 123 aa9.89□□□□□ -0.83
VPS8-227ENST00000625842 NUDT7P0C024 238 aa9.89□□□□□ -0.83
VPS8-227ENST00000625842 OXA1LQ15070 435 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms