RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CRB3Q9BUF7 120 aa9.93□□□□□ -0.82
VARS2-213ENST00000625423 ST6GALNAC5Q9BVH7 336 aa9.93□□□□□ -0.82
VARS2-213ENST00000625423 PRDM6Q9NQX0 595 aa9.93□□□□□ -0.82
VARS2-213ENST00000625423 SHPKQ9UHJ6 478 aa9.93□□□□□ -0.82
VARS2-213ENST00000625423 IGLV3-32A0A0A0MS00 114 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 SDCBPO00560 298 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 SGCAQ16586 387 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 PRAMEF20Q5VT98 475 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 C1QL2Q7Z5L3 287 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 GTPBP8Q8N3Z3 284 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 ZSCAN4Q8NAM6 433 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 OR56B1Q8NGI3 324 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 OR5H2Q8NGV7 314 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 LIN37Q96GY3 246 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 NKX6-2Q9C056 277 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 RALGAPA1Q6GYQ0 2036 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 TEX13DA0A0J9YY54 714 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 MFNGO00587 321 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 HTR3BO95264 441 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 SFT2D2O95562 160 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 WDPCPO95876 746 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 AMY2BP19961 511 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 DHPSP49366 369 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 SHBQ15464 509 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 CCDC36Q8IYA8 594 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 WDSUB1Q8N9V3 476 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 OR51T1Q8NGJ9 327 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 OR14K1Q8NGZ2 314 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 PAQR8Q8TEZ7 354 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 OCSTAMPQ9BR26 566 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 RTBDNQ9BSG5 229 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 OR10A2Q9H208 303 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 MRPS17Q9Y2R5 130 aaKnown RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 FLVCR1Q9Y5Y0 555 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 B3GALT1Q9Y5Z6 326 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 F8VVB4 439 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 F8VWA3 439 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 TPT1P13693 172 aaKnown RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 CCL1P22362 96 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 CLDN17P56750 224 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 SUPT4H1P63272 117 aaKnown RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 CYCSP99999 105 aaKnown RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 HIST3H3Q16695 136 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 ACTBL2Q562R1 376 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 GUSBP11Q6P575 273 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 OR13G1Q8NGZ3 307 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 DNASE2BQ8WZ79 361 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 RASL10BQ96S79 203 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 SPSB2Q99619 263 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 URM1Q9BTM9 101 aaKnown RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 ZNF416Q9BWM5 594 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 AKIRIN1Q9H9L7 192 aaPredicted RBP9.92□□□□□ -0.82
VARS2-213ENST00000625423 SLC39A1Q9NY26 324 aa9.92□□□□□ -0.82
VARS2-213ENST00000625423 TRBV6-7A0A0A0MS04 114 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 MSGN1A6NI15 193 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 ICAM2P13598 275 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 PNLIPRP3Q17RR3 467 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 ANKRD55Q3KP44 614 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 STOML3Q8TAV4 291 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 SLC22A8Q8TCC7 542 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 SSC4DQ8WTU2 575 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 TMED6Q8WW62 240 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 PGAM5Q96HS1 289 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 LYZL4Q96KX0 146 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 DEFB126Q9BYW3 111 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 CYTL1Q9NRR1 136 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 RARRES3Q9UL19 164 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 WDFY3Q8IZQ1 3526 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 ADAMTS20P59510 1910 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 COL6A3P12111 3177 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 CEACAM18A8MTB9 384 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 FGF16O43320 207 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 GLRA1P23415 457 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 FPR2P25090 351 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 OR3A2P47893 321 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 ZNF169Q14929 603 aaPredicted RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 KISS1Q15726 138 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 KCNMB1Q16558 191 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 PDSS1Q5T2R2 415 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 SPACA9Q96E40 222 aaPredicted RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 CDX2Q99626 313 aaPredicted RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 OR5AC2Q9NZP5 309 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 A0A1W2PQM1 296 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 TMEM218A2RU14 115 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 RAB19A4D1S5 217 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 AQP7P3A6NL99 342 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 F5H5K5 113 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 GPR31O00270 319 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 TOX3O15405 576 aaPredicted RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 ATG12O94817 140 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 SLC6A9P48067 706 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 SNU13P55769 128 aaKnown RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 GRB2P62993 217 aaKnown RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 CSNK2A1P68400 391 aaPredicted RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 AIMP2Q13155 320 aaKnown RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 NKAPLQ5M9Q1 402 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 AADACL3Q5VUY0 350 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 CRIP3Q6Q6R5 217 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 UQCC3Q6UW78 93 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms