RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 BRS3P32247 399 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 RABIFP47224 123 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
LITAF-221ENST00000622633 SLC25A1P53007 311 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 NKX6-1P78426 367 aaPredicted RBP11.1□□□□□ -0.63
LITAF-221ENST00000622633 FUT7Q11130 342 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 Q499Y3 187 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 WBP2NLQ6ICG8 309 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 MEX3BQ6ZN04 569 aaKnown RBP11.1□□□□□ -0.63
LITAF-221ENST00000622633 FAM220AQ7Z4H9 259 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 ATG4DQ86TL0 474 aaPredicted RBP11.1□□□□□ -0.63
LITAF-221ENST00000622633 DND1Q8IYX4 353 aaKnown RBP11.1□□□□□ -0.63
LITAF-221ENST00000622633 RNASEH2CQ8TDP1 164 aaKnown RBP11.1□□□□□ -0.63
LITAF-221ENST00000622633 MMABQ96EY8 250 aaPredicted RBP11.1□□□□□ -0.63
LITAF-221ENST00000622633 MICU1Q9BPX6 476 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 SUSD2Q9UGT4 822 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 PADI1Q9ULC6 663 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 HIF3AQ9Y2N7 669 aa11.1□□□□□ -0.63
LITAF-221ENST00000622633 TRAV8-7A0A075B6U6 113 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 TMEM235A6NFC5 223 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ZNF705GA8MUZ8 300 aaPredicted RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 AGPAT2O15120 278 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 MAS1P04201 325 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 TPT1P13693 172 aaKnown RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 DVL1P1P54792 670 aaPredicted RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 TAS2R20P59543 309 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 IGLV3-21P80748 117 aaPredicted RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 DLX2Q07687 328 aaPredicted RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 OR5I1Q13606 314 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ZNF674Q2M3X9 581 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 LRRC37A5PQ49AS3 106 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 TMPRSS12Q86WS5 348 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 OR10AC1Q8NH08 325 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 HAVCR1Q96D42 359 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 RRNAD1Q96FB5 475 aaKnown RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 LPAR4Q99677 370 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 NKX2-4Q9H2Z4 354 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 RGCCQ9H4X1 137 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 MMP24Q9Y5R2 645 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ABHD16AO95870 558 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 IGHV4-34P06331 123 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ERCC1P07992 297 aaPredicted RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 IL6RP08887 468 aaPredicted RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 RAB40ALP0C0E4 278 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 CALCBP10092 127 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 PNMTP11086 282 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ITPKBP27987 946 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 NOVA1P51513 510 aaKnown RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 RAP1BP61224 184 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 EIF5AP63241 154 aaKnown RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 EGR4Q05215 589 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ZP2Q05996 745 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 FZD2Q14332 565 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 TAF13Q15543 124 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.09□□□□□ -0.63
LITAF-221ENST00000622633 ZNF529Q6P280 563 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 BTNL3Q6UXE8 466 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 MIB2Q96AX9 1013 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 KTI12Q96EK9 354 aaPredicted RBP11.09□□□□□ -0.63
LITAF-221ENST00000622633 NUDT11Q96G61 164 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 ULBP3Q9BZM4 244 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 RAB33BQ9H082 229 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 CSTL1Q9H114 145 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 SYT4Q9H2B2 425 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 WDR76Q9H967 626 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 MMP25Q9NPA2 562 aa11.09□□□□□ -0.63
LITAF-221ENST00000622633 CACNA1IQ9P0X4 2223 aa11.08□□□□□ -0.63
LITAF-221ENST00000622633 EML5Q05BV3 1969 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 SPTBN5Q9NRC6 3674 aaKnown RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 PRAMEF26H0Y7S4 382 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 OR2C1O95371 312 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 CLPSP04118 112 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 PPM1FP49593 454 aaPredicted RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 ACTBP60709 375 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 ACTG1P63261 375 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 RPL18Q07020 188 aaKnown RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 AIMP2Q13155 320 aaKnown RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 CBFBQ13951 182 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 RHEBQ15382 184 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 SHHQ15465 462 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 OR2T2Q6IF00 324 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 TMEM184AQ6ZMB5 413 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 DPY19L4Q7Z388 723 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 CD163Q86VB7 1156 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 CDC20BQ86Y33 519 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 KMT5CQ86Y97 462 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 ZNF440Q8IYI8 595 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 SEMA6DQ8NFY4 1073 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 OR51A4Q8NGJ6 313 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 OR1J1Q8NGS3 322 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 OR6N2Q8NGY6 317 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 CCDC74AQ96AQ1 378 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
LITAF-221ENST00000622633 CHST6Q9GZX3 395 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 ZFP30Q9Y2G7 519 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 TRBV5-5A0A0J9YX44 114 aa11.08□□□□□ -0.64
LITAF-221ENST00000622633 ACOT7O00154 380 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms