RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ABCA11PQ4W5N1 156 aa2.94□□□□□ -1.94
CPNE3-213ENST00000622183 TMEM256Q8N2U0 113 aa2.94□□□□□ -1.94
CPNE3-213ENST00000622183 EMC6Q9BV81 110 aa2.94□□□□□ -1.94
CPNE3-213ENST00000622183 OR51B5Q9H339 312 aa2.94□□□□□ -1.94
CPNE3-213ENST00000622183 EXOSC4Q9NPD3 245 aaKnown RBP2.94□□□□□ -1.94
CPNE3-213ENST00000622183 NECAP2Q9NVZ3 263 aa2.94□□□□□ -1.94
CPNE3-213ENST00000622183 RBFOX1Q9NWB1 397 aaKnown RBP2.94□□□□□ -1.94
CPNE3-213ENST00000622183 GGA2Q9UJY4 613 aa2.94□□□□□ -1.94
CPNE3-213ENST00000622183 KLF12Q9Y4X4 402 aa2.94□□□□□ -1.94
CPNE3-213ENST00000622183 AQRO60306 1485 aaKnown RBP eCLIP2.94□□□□□ -1.946e-8■■■■■ 35.8
CPNE3-213ENST00000622183 LRP4O75096 1905 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 ZNFX1Q9P2E3 1918 aaKnown RBP2.93□□□□□ -1.94
CPNE3-213ENST00000622183 A0A0A6YYD5 115 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 NDUFS8O00217 210 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 EIF1BO60739 113 aaKnown RBP2.93□□□□□ -1.94
CPNE3-213ENST00000622183 UPK1BO75841 260 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 TRAPPC6AO75865 159 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 CCNKO75909 580 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 CCNE2O96020 404 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 TRBV12-3P01733 135 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 IVLP07476 585 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 NEFHP12036 1026 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 MUC1P15941 1255 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-213ENST00000622183 CXCR1P25024 350 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 LOXP28300 417 aaPredicted RBP2.93□□□□□ -1.94
CPNE3-213ENST00000622183 EIF1P41567 113 aaKnown RBP2.93□□□□□ -1.94
CPNE3-213ENST00000622183 HCCSP53701 268 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 CPTPQ5TA50 214 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 AADACL4Q5VUY2 407 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 AP1ARQ63HQ0 302 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 STEAP4Q687X5 459 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 ZFP1Q6P2D0 407 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 OPN5Q6U736 354 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 MDP1Q86V88 176 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 PDCL2Q8N4E4 241 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 LINC00469Q8N7U9 141 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 OR4M1Q8NGD0 313 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 RXFP2Q8WXD0 754 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 TMEM234Q8WY98 164 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 ESR2Q92731 530 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 GHSRQ92847 366 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 L3HYPDHQ96EM0 354 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 RNF170Q96K19 258 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 TBL1YQ9BQ87 522 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 SULT4A1Q9BR01 284 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 ARV1Q9H2C2 271 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 XKR8Q9H6D3 395 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 SIRT7Q9NRC8 400 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 SIGLEC7Q9Y286 467 aa2.93□□□□□ -1.94
CPNE3-213ENST00000622183 IGKV2-28A0A075B6P5 120 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 A0A1W2PNU3 283 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-213ENST00000622183 PSPHP1O15172 72 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 WISP3O95389 354 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-213ENST00000622183 IGKV2D-28P01615 120 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 MT-ND4P03905 459 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 CCDC172P0C7W6 258 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 ZNF806P0C7X5 589 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 ME2P23368 584 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 APLNRP35414 380 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 TAS2R60P59551 318 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 ST3GAL4Q11206 333 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 NAB1Q13506 487 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 ZNF645Q8N7E2 425 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 TTLQ8NG68 377 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 ZNF461Q8TAF7 563 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 ENKURQ8TC29 256 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 C17orf50Q8WW18 174 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 CACNG8Q8WXS5 425 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 CDS1Q92903 461 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 SLC25A46Q96AG3 418 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 LRRC39Q96DD0 335 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 CENPNQ96H22 339 aaPredicted RBP2.92□□□□□ -1.94
CPNE3-213ENST00000622183 OR4K3Q96R72 315 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 TSNAXQ99598 290 aaKnown RBP2.92□□□□□ -1.94
CPNE3-213ENST00000622183 RNF5Q99942 180 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 SIKE1Q9BRV8 207 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 SFXN3Q9BWM7 321 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 MAP1LC3CQ9BXW4 147 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 CHRNA10Q9GZZ6 450 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 HAUS4Q9H6D7 363 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 RHBDL2Q9NX52 303 aa2.92□□□□□ -1.94
CPNE3-213ENST00000622183 SCRIBQ14160 1630 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 IGHV2OR16-5A0A0B4J2B6 119 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 FAM25EA8MYX2 175 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 RFXANKO14593 260 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 SMC2O95347 1197 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 PTTG1O95997 202 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 IGLV3-25P01717 112 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 TPM1P09493 284 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 SLC35G6P0C7Q6 338 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 NPY1RP25929 384 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 GNRHRP30968 328 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 CASQ1P31415 396 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 ETV1P50549 477 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 LINC00315P59091 139 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 SLC35A1P78382 337 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 XIAPP98170 497 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 C2orf54Q08AI8 447 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 CDC20Q12834 499 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 VAMP3Q15836 100 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms