RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 UFD1Q92890 307 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 CREB3L1Q96BA8 519 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TLCD1Q96CP7 247 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 APOL4Q9BPW4 351 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 AGMATQ9BSE5 352 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TM2D1Q9BX74 207 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 ULBP1Q9BZM6 244 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TRIM4Q9C037 500 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 DSN1Q9H410 356 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TRABDQ9H4I3 376 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 BEX1Q9HBH7 125 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 FBXO8Q9NRD0 319 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 INIPQ9NRY2 104 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 AGPAT4Q9NRZ5 378 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 GID8Q9NWU2 228 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 CMTM6Q9NX76 183 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 SLC25A37Q9NYZ2 338 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 LGALS13Q9UHV8 139 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TMCO1Q9UM00 188 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 COPS3Q9UNS2 423 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 KCNIP3Q9Y2W7 256 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 SNAPC4Q5SXM2 1469 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 NUP160Q12769 1436 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 FLT4P35916 1363 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SMIM28A0A1B0GU29 152 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 A6NIZ1 184 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF233A6NK53 670 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 C21orf140B9A014 251 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 H3BMQ9 156 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 H7C2Y5 167 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 CXCR6O00574 342 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SLC9A3R1O14745 358 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 CRXO43186 299 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 ERI3O43414 337 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 TOM1O60784 492 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 CTDNEP1O95476 244 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 TDP2O95551 362 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 KRT75O95678 551 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 OXSR1O95747 527 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 LSM8O95777 96 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 CATP04040 527 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 IFNA16P05015 189 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 IGFBP3P17936 291 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 CSNK2A2P19784 350 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 NTSP30990 170 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 FGF9P31371 208 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SSTR5P35346 364 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 OMPP47874 163 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 HCAR3P49019 387 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 OR10A3P58181 314 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 RHOAP61586 193 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 RPS14P62263 151 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 RPL31P62899 125 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 FAM3AP98173 230 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 TFAMQ00059 246 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 PRKCDQ05655 676 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 DYNC1I2Q13409 638 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 KRR1Q13601 381 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 RAB31Q13636 194 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SMCO1Q147U7 214 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 HERPUD1Q15011 391 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SLC9A3R2Q15599 337 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 IL17AQ16552 155 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 CPTPQ5TA50 214 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 HES5Q5TA89 166 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 MOB1BQ7L9L4 216 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 FAM19A1Q7Z5A9 133 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 TMED4Q7Z7H5 227 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 IFNEQ86WN2 208 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 STK40Q8N2I9 435 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 MREGQ8N565 214 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 ATP6V0D2Q8N8Y2 350 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 C12orf29Q8N999 325 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 Q8N9L7 120 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM35BQ8NCS4 154 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 OR1M1Q8NGA1 313 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SFXN5Q8TD22 340 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 OR5P2Q8WZ92 322 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SMIM19Q96E16 107 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 OXGR1Q96P68 337 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM59Q9BXS4 323 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 ARL6Q9H0F7 186 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 UGT1A7Q9HAW7 530 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 EML4Q9HC35 981 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 ABCB9Q9NP78 766 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 IFT46Q9NQC8 304 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 B3GNT2Q9NY97 397 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 RAB26Q9ULW5 256 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 SNX24Q9Y343 169 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 ROCK2O75116 1388 aaKnown RBP2.74□□□□□ -1.97
BRCA1-229ENST00000621897 PLEKHH1Q9ULM0 1364 aa2.74□□□□□ -1.97
BRCA1-229ENST00000621897 TAF1LQ8IZX4 1826 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 KIR2DS1A0A191URI9 304 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 A0A1B0GV72 72 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 USP27XA6NNY8 438 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 C11orf98E9PRG8 122 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 GFYI3L273 518 aa2.73□□□□□ -1.97
BRCA1-229ENST00000621897 CDC7O00311 574 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms