RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 ZNF85Q03923 595 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 TESK1Q15569 626 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 MRGPREQ86SM8 312 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 PTOV1Q86YD1 416 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 NPEPL1Q8NDH3 523 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 ZCCHC14Q8WYQ9 949 aaKnown RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 IKZF5Q9H5V7 419 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 FLVCR1Q9Y5Y0 555 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 CACNA1GO43497 2377 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 LAMB2P55268 1798 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 TAF1P21675 1872 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 ADAM20O43506 726 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 PRF1P14222 555 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 ELK1P19419 428 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 ALOX5APP20292 161 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 CCR9P51686 369 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 PRDX4Q13162 271 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 EBPQ15125 230 aaKnown RBP8.78□□□□□ -1
CLTCL1-211ENST00000621271 CYSLTR2Q9NS75 346 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 SP9P0CG40 484 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 D2HGDHQ8N465 521 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 NRXN2Q9P2S2 1712 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 FER1L6Q2WGJ9 1857 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 KCNE1BA0A087WTH5 132 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 A0A0B4J2A0 478 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 hADV38S2A0JD32 116 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 C16orf97H3BN30 126 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 F2RL2O00254 374 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 NKX2-2O95096 273 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 CYC1P08574 325 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 FAHP16930 419 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 MAGEA5P43359 124 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 KIR2DL1P43626 348 aaPredicted RBP8.78□□□□□ -1
CLTCL1-211ENST00000621271 XAF1Q6GPH4 301 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 DRAM2Q6UX65 266 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 ZNF793Q6ZN11 406 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 TMEM179BQ7Z7N9 219 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 BPIFCQ8NFQ6 507 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 NUBPLQ8TB37 319 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 KTI12Q96EK9 354 aaPredicted RBP8.78□□□□□ -1
CLTCL1-211ENST00000621271 SHPKQ9UHJ6 478 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 ACKR3P25106 362 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 C19orf48Q6RUI8 117 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 FAM58AQ8N1B3 248 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 PP6455Q8WZ26 134 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 TMEM208Q9BTX3 173 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 SCPEP1Q9HB40 452 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 RPS10-NUDT3A0A1W2PQS6 291 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 B4E171 279 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 ST8SIA3O43173 380 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 SNRNP70P08621 437 aaKnown RBP8.78□□□□□ -1
CLTCL1-211ENST00000621271 CA6P23280 308 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 TSPAN7P41732 249 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 PSMB3P49720 205 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 RAB5CP51148 216 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 Q56UQ5 140 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 PABPC1L2AQ5JQF8 200 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 FAHD1Q6P587 224 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 SYS1Q8N2H4 156 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 TEX29Q8N6K0 151 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 HSD17B11Q8NBQ5 300 aa8.78□□□□□ -1
CLTCL1-211ENST00000621271 SLIRPQ9GZT3 109 aaKnown RBP8.78□□□□□ -1
CLTCL1-211ENST00000621271 A0A0B4J203 849 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 TRAV38-1A0A0B4J264 116 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 ZAR1LA6NP61 321 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF705FA8MVS1 300 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 HLA-HP01893 362 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF705DP0CH99 300 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF705BP0CI00 300 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 ZFP36L2P47974 494 aaKnown RBP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 PPP1CBP62140 327 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 TOMM34Q15785 309 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 FAM26EQ8N5C1 309 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 KDF1Q8NAX2 398 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 OR5D13Q8NGL4 314 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 LRRC29Q8WV35 223 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 MS4A5Q9H3V2 200 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 ZNF785A8K8V0 405 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 IMPA2O14732 288 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 HPNP05981 417 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 DUSP1P28562 367 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 THBS4P35443 961 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 AVPI1Q5T686 147 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 SFTPA1Q8IWL2 248 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 GRAMD2BQ96HH9 432 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 CIB3Q96Q77 187 aaPredicted RBP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 SLC22A13Q9Y226 551 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 PUS1Q9Y606 427 aaKnown RBP eCLIP8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 DNAJC13O75165 2243 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 GALNSP34059 522 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 RFX2P48378 723 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 GNG10P50151 68 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 CLDN20P56880 219 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 TCTN1Q2MV58 587 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 SPANXN5Q5MJ07 72 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 CLEC2AQ6UVW9 174 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 SSX8Q7RTT4 187 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 TCTE3Q8IZS6 198 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 LINC01555Q8NAE3 123 aa8.77□□□□□ -1.01
CLTCL1-211ENST00000621271 OR10P1Q8NGE3 313 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms