RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SLC25A1P53007 311 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ZNF121P58317 390 aaPredicted RBP9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ARF6P62330 175 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 IL13RA1P78552 427 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 MXRA7P84157 204 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 EIF2B1Q14232 305 aaKnown RBP9.44□□□□□ -0.9
CPNE3-210ENST00000621245 GFOD2Q3B7J2 385 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 WDR38Q5JTN6 314 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 GPR157Q5UAW9 335 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 LCN8Q6JVE9 175 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 C16orf87Q6PH81 154 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 C16orf89Q6UX73 402 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 TREML4Q6UXN2 200 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 Q6YL49 198 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 FAM57BQ71RH2 274 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 BTN2A1Q7KYR7 527 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 DPY19L4Q7Z388 723 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ERI1Q8IV48 349 aaKnown RBP9.44□□□□□ -0.9
CPNE3-210ENST00000621245 FAM216BQ8N7L0 139 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 LRRC29Q8WV35 223 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 EDARADDQ8WWZ3 215 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 LHX4Q969G2 390 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ERGIC1Q969X5 290 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 REEP6Q96HR9 211 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 CLPTM1LQ96KA5 538 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 CCL13Q99616 98 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 PDP1Q9P0J1 537 aaPredicted RBP9.44□□□□□ -0.9
CPNE3-210ENST00000621245 DNAJB11Q9UBS4 358 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ARL2BPQ9Y2Y0 163 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ACOT8O14734 319 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 SELENOFO60613 162 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 KRT36O76013 467 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 ACKR3P25106 362 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 FMO3P31513 532 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 RAG2P55895 527 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 GMFBP60983 142 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 KLRD1Q13241 179 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 TAF13Q15543 124 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 MICAQ29983 383 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 TEX30Q5JUR7 227 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 TEX36Q5VZQ5 186 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 RPL13AP3Q6NVV1 102 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 WDR82Q6UXN9 313 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 TIGD4Q8IY51 512 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 HS3ST5Q8IZT8 346 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 PNKDQ8N490 385 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 OR2T33Q8NG76 320 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 OR10G2Q8NGC3 310 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 OR6N2Q8NGY6 317 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 RNF133Q8WVZ7 376 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 ST8SIA4Q92187 359 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 ABHD6Q9BV23 337 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 DGCR6LQ9BY27 220 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 CMC2Q9NRP2 79 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 ERVK-18Q9QC07 812 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 ADAM30Q9UKF2 790 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 RHBDD3Q9Y3P4 386 aa9.43□□□□□ -0.9
CPNE3-210ENST00000621245 SAMHD1Q9Y3Z3 626 aaKnown RBP9.43□□□□□ -0.9
CPNE3-210ENST00000621245 TRAV38-1A0A0B4J264 116 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 IGHV1-69DA0A0B4J2H0 117 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 P2RY10O00398 339 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 IGHV1-69P01742 117 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 T-ENOLP0DO92 83 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 OPRL1P41146 370 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 GSK3AP49840 483 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 NPY4RP50391 375 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 TIGD6Q17RP2 521 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 DMRTC1Q5HYR2 192 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 HIST2H2BDQ6DRA6 164 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 OR2T5Q6IEZ7 315 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 RHOUQ7L0Q8 258 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 VMO1Q7Z5L0 202 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 LINC00471Q8N535 108 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 BBS1Q8NFJ9 593 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 OR1M1Q8NGA1 313 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 OR5T2Q8NGG2 359 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 OR2T29Q8NH02 315 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 OTULINQ96BN8 352 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 LYZL4Q96KX0 146 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 INTS14Q96SY0 518 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 WNT10AQ9GZT5 417 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 SLC22A4Q9H015 551 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 WDR13Q9H1Z4 485 aa9.42□□□□□ -0.9
CPNE3-210ENST00000621245 RPUSD1Q9UJJ7 312 aaKnown RBP9.42□□□□□ -0.9
CPNE3-210ENST00000621245 DSCAML1Q8TD84 2053 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 A0A1W2PRD5 423 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 A0A1W2PRF3 423 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 A0A1W2PRM7 423 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 ANKRD30BLA7E2S9 258 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 XRCC2O43543 280 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 HSD11B1P28845 292 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 IKZF1Q13422 519 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 STUMQ69YW2 141 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 ADGRG5Q8IZF4 528 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 Q8N7P7 452 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 OR8S1Q8NH09 359 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 HPSE2Q8WWQ2 592 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 RPL3LQ92901 407 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms