RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TXNL4BQ9NX01 149 aaKnown RBP6.59□□□□□ -1.35
CLK1-215ENST00000621181 ERVK13-1Q9NX77 482 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 DCAF16Q9NXF7 216 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 TVP23BQ9NYZ1 205 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 OR5V1Q9UGF6 321 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 INSIG2Q9Y5U4 225 aa6.59□□□□□ -1.35
CLK1-215ENST00000621181 DOCK11Q5JSL3 2073 aa6.59□□□□□ -1.36
CLK1-215ENST00000621181 IGHV3OR16-10A0A075B7F0 116 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 H3BN98 237 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 TIMM8AO60220 97 aaPredicted RBP6.58□□□□□ -1.36
CLK1-215ENST00000621181 FMO6PO60774 539 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 F13BP05160 661 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 ADH4P08319 380 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 LIMS3P0CW19 117 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 LIMS4P0CW20 117 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 ZNF32P17041 273 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 TNFSF4P23510 183 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 PSMA1P25786 263 aaKnown RBP6.58□□□□□ -1.36
CLK1-215ENST00000621181 CDAP32320 146 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 RBMXP38159 391 aaKnown RBP6.58□□□□□ -1.36
CLK1-215ENST00000621181 WNT5AP41221 380 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 OMPP47874 163 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 SLC6A9P48067 706 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 RORCP51449 518 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 PPP1CBP62140 327 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 BTG1P62324 171 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 ERVK-25P63136 954 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 HNRNPA0Q13151 305 aaKnown RBP6.58□□□□□ -1.36
CLK1-215ENST00000621181 BAK1Q16611 211 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 HIST3H3Q16695 136 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 TMEM155Q4W5P6 130 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 NXNL2Q5VZ03 156 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 LINC00114Q6XXX2 140 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 RFPL4BQ6ZWI9 263 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 HDDC2Q7Z4H3 204 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 JAZF1Q86VZ6 243 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 C1orf174Q8IYL3 243 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 OR6F1Q8NGZ6 308 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 AKR7LQ8NHP1 331 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 TMEM163Q8TC26 289 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 POM121L2Q96KW2 1035 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 FNDC11Q9BVV2 318 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 POLR2J2Q9GZM3 115 aaKnown RBP6.58□□□□□ -1.36
CLK1-215ENST00000621181 ANKRD19PQ9H560 264 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 C14orf119Q9NWQ9 140 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 SLC7A7Q9UM01 511 aa6.58□□□□□ -1.36
CLK1-215ENST00000621181 POLR3KQ9Y2Y1 108 aaPredicted RBP6.58□□□□□ -1.36
CLK1-215ENST00000621181 LOC100509620A0A075B734 347 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 TRAV40A0A0B4J280 105 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 RGS13O14921 159 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 PRODHO43272 600 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 SLC2A10O95528 541 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 THY1P04216 161 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 CRYBA1P05813 215 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 CD55P08174 381 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 CLEC2LP0C7M8 214 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 ASAH2BP0C7U1 165 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 GSTT2P0CG29 244 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 GSTT2BP0CG30 244 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 IGHV4-38-2P0DP08 117 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 GSTM3P21266 225 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 FGF9P31371 208 aaPredicted RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 DAP3P51398 398 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 DEFA1P59665 94 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 DEFA3P59666 94 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 MRPS34P82930 218 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 RPL18Q07020 188 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 SRSF4Q08170 494 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 RAB40BQ12829 278 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 TSPAN31Q12999 210 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 SGCAQ16586 387 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 SPRNQ5BIV9 151 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 AADACL4Q5VUY2 407 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 LIPKQ5VXJ0 399 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 BTNL3Q6UXE8 466 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 TMPRSS11AQ6ZMR5 421 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 RASSF6Q6ZTQ3 369 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 NRARPQ7Z6K4 114 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 LAX1Q8IWV1 398 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 OR2Z1Q8NG97 314 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 WFDC12Q8WWY7 111 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 NSMAFQ92636 917 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 NEDD4LQ96PU5 975 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 JAM3Q9BX67 310 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 MRPL13Q9BYD1 178 aaKnown RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 ELOVL3Q9HB03 270 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 SNTG1Q9NSN8 517 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 PPP1R3CQ9UQK1 317 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 TRAPPC13A5PLN9 417 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 FAM181BA6NEQ2 426 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 A8MXK9 166 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 CENPBD1B2RD01 187 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 J3QRE1 110 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 HOXA3O43365 443 aaPredicted RBP6.57□□□□□ -1.36
CLK1-215ENST00000621181 CDRT1O95170 752 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 NGFP01138 241 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 NR2C1P13056 603 aa6.57□□□□□ -1.36
CLK1-215ENST00000621181 IL7P13232 177 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms