RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 D2HGDHQ8N465 521 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 APCDD1LQ8NCL9 501 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 NOXO1Q8NFA2 376 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 ADAMTS17Q8TE56 1095 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 MAFIPQ8WZ33 124 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 ST6GALNAC5Q9BVH7 336 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 SLC5A7Q9GZV3 580 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 SLC26A1Q9H2B4 701 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 ASH2LQ9UBL3 628 aa18.01■□□□□ 0.47
NEK3-208ENST00000618534 UNC13CQ8NB66 2214 aa18■□□□□ 0.47
NEK3-208ENST00000618534 MUC1P15941 1255 aaPredicted RBP18■□□□□ 0.47
NEK3-208ENST00000618534 GLRA1P23415 457 aa18■□□□□ 0.47
NEK3-208ENST00000618534 RFC3P40938 356 aa18■□□□□ 0.47
NEK3-208ENST00000618534 SUMO3P55854 103 aaPredicted RBP18■□□□□ 0.47
NEK3-208ENST00000618534 OGFOD3Q6PK18 319 aa18■□□□□ 0.47
NEK3-208ENST00000618534 LHFPL1Q86WI0 220 aa18■□□□□ 0.47
NEK3-208ENST00000618534 POC1AQ8NBT0 407 aa18■□□□□ 0.47
NEK3-208ENST00000618534 OR56B1Q8NGI3 324 aa18■□□□□ 0.47
NEK3-208ENST00000618534 NRIP2Q9BQI9 281 aa18■□□□□ 0.47
NEK3-208ENST00000618534 FANCFQ9NPI8 374 aa18■□□□□ 0.47
NEK3-208ENST00000618534 RER1O15258 196 aa18■□□□□ 0.47
NEK3-208ENST00000618534 FARS2O95363 451 aaKnown RBP18■□□□□ 0.47
NEK3-208ENST00000618534 CSTBP04080 98 aaKnown RBP18■□□□□ 0.47
NEK3-208ENST00000618534 PGA4P0DJD7 388 aa18■□□□□ 0.47
NEK3-208ENST00000618534 PGA3P0DJD8 388 aa18■□□□□ 0.47
NEK3-208ENST00000618534 S100A10P60903 97 aa18■□□□□ 0.47
NEK3-208ENST00000618534 ZNF528Q3MIS6 628 aa18■□□□□ 0.47
NEK3-208ENST00000618534 Q7L0L9 218 aa18■□□□□ 0.47
NEK3-208ENST00000618534 UEVLDQ8IX04 471 aa18■□□□□ 0.47
NEK3-208ENST00000618534 PLPP5Q8NEB5 264 aa18■□□□□ 0.47
NEK3-208ENST00000618534 C2orf50Q96LR7 162 aa18■□□□□ 0.47
NEK3-208ENST00000618534 RHOFQ9HBH0 211 aa18■□□□□ 0.47
NEK3-208ENST00000618534 SLC22A11Q9NSA0 550 aa18■□□□□ 0.47
NEK3-208ENST00000618534 GSKIPQ9P0R6 139 aa18■□□□□ 0.47
NEK3-208ENST00000618534 OSGIN2Q9Y236 505 aa18■□□□□ 0.47
NEK3-208ENST00000618534 CEP290O15078 2479 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 RPS2P15880 293 aaKnown RBP17.99■□□□□ 0.47
NEK3-208ENST00000618534 NFYBP25208 207 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 CD27P26842 260 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 OR3A2P47893 321 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 DHPSP49366 369 aaPredicted RBP17.99■□□□□ 0.47
NEK3-208ENST00000618534 OR5D18Q8NGL1 313 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 ESRP2Q9H6T0 727 aaKnown RBP17.99■□□□□ 0.47
NEK3-208ENST00000618534 PISDQ9UG56 409 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 IGKV1-9A0A0C4DH69 117 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 IGHG1P01857 330 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 HOXB5P09067 269 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 CSNK2A1P68400 391 aaPredicted RBP17.99■□□□□ 0.47
NEK3-208ENST00000618534 GABREP78334 506 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 FAM57BQ71RH2 274 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 CSNK2A3Q8NEV1 391 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 ZNF775Q96BV0 537 aaPredicted RBP17.99■□□□□ 0.47
NEK3-208ENST00000618534 SCGB3A2Q96PL1 93 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 URM1Q9BTM9 101 aaKnown RBP17.99■□□□□ 0.47
NEK3-208ENST00000618534 ZFP57Q9NU63 452 aa17.99■□□□□ 0.47
NEK3-208ENST00000618534 RCC2Q9P258 522 aaKnown RBP17.99■□□□□ 0.47
NEK3-208ENST00000618534 LRP3O75074 770 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 MYF5P13349 255 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 RCC1P18754 421 aaPredicted RBP17.98■□□□□ 0.47
NEK3-208ENST00000618534 LTBRP36941 435 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 LPAR6P43657 344 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 P2RY4P51582 365 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 SNU13P55769 128 aaKnown RBP17.98■□□□□ 0.47
NEK3-208ENST00000618534 RPL7L1Q6DKI1 246 aaKnown RBP17.98■□□□□ 0.47
NEK3-208ENST00000618534 TSTD1Q8NFU3 115 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 STT3BQ8TCJ2 826 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 SMIM8Q96KF7 97 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 OR10A2Q9H208 303 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 PNRC2Q9NPJ4 139 aaKnown RBP17.98■□□□□ 0.47
NEK3-208ENST00000618534 EHFQ9NZC4 300 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 KLRF1Q9NZS2 232 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 C2CD4DB7Z1M9 353 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 CTAG1AP78358 180 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 IL15RAQ13261 267 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 PLXDC1Q8IUK5 500 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 FOXRED2Q8IWF2 684 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 OR51T1Q8NGJ9 327 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 POC1BQ8TC44 478 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 FGF21Q9NSA1 209 aa17.98■□□□□ 0.47
NEK3-208ENST00000618534 A0A1W2PNR3 127 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 PMS2P1A4D2B8 440 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 C5orf63A6NC05 138 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 ZNF814B7Z6K7 855 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 TRAF3IP2O43734 574 aaPredicted RBP17.97■□□□□ 0.47
NEK3-208ENST00000618534 CAV2P51636 162 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 ZNF41P51814 821 aaPredicted RBP17.97■□□□□ 0.47
NEK3-208ENST00000618534 C1QL2Q7Z5L3 287 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 SSC4DQ8WTU2 575 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 NPRL2Q8WTW4 380 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 ZNF501Q96CX3 271 aaPredicted RBP17.97■□□□□ 0.47
NEK3-208ENST00000618534 SAT2Q96F10 170 aaPredicted RBP17.97■□□□□ 0.47
NEK3-208ENST00000618534 PPP4R1LQ9P1A2 415 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 E9PLN8 166 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 CCL1P22362 96 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 NME2P22392 152 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 CBX5P45973 191 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 HNRNPKP61978 463 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■■■■□ 21.8
NEK3-208ENST00000618534 PDZK1IP1Q13113 114 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 PLPPR5Q32ZL2 321 aa17.97■□□□□ 0.47
NEK3-208ENST00000618534 ZNF283Q8N7M2 679 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms