RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 GABRA6Q16445 453 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 TRIQKQ629K1 86 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 UTS2BQ765I0 119 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 OR5AS1Q8N127 324 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 GABRG1Q8N1C3 465 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 DTX3Q8N9I9 347 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 C1orf162Q8NEQ5 155 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 SEMA6DQ8NFY4 1073 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 OR52N4Q8NGI2 321 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 OR2AE1Q8NHA4 323 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 AKAP1Q92667 903 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 SPSB4Q96A44 273 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 STARD4Q96DR4 205 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 COX4I2Q96KJ9 171 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 POM121L2Q96KW2 1035 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 ABHD1Q96SE0 405 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 SLX1AQ9BQ83 275 aa7.73□□□□□ -1.17
CCDC47-207ENST00000612558 CGGBP1Q9UFW8 167 aaPredicted RBP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 SPENQ96T58 3664 aaKnown RBP7.73□□□□□ -1.17
CCDC47-207ENST00000612558 A0A1W2PQ09 198 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 PRRG2O14669 202 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 CTDSPLO15194 276 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 RAD51DO75771 328 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 LYZL6O75951 148 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 TOXO94900 526 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 PTTG1O95997 202 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 HLA-DQB1P01920 261 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 SERPINA5P05154 406 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 OCMP0CE72 109 aaPredicted RBP7.72□□□□□ -1.17
CCDC47-207ENST00000612558 EDN3P14138 238 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 PRF1P14222 555 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 FAHP16930 419 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 CCNOP22674 350 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 APLNRP35414 380 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 ZNF92Q03936 586 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 P2RY6Q15077 328 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 BEND4Q6ZU67 534 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 MDP1Q86V88 176 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 ZNF584Q8IVC4 421 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 ZNF610Q8N9Z0 462 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 C19orf18Q8NEA5 215 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 OR4D6Q8NGJ1 314 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 C15orf40Q8WUR7 153 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 ITFG2Q969R8 447 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 PTX4Q96A99 478 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 APOBEC3DQ96AK3 386 aaPredicted RBP7.72□□□□□ -1.17
CCDC47-207ENST00000612558 SNRNP40Q96DI7 357 aaKnown RBP7.72□□□□□ -1.17
CCDC47-207ENST00000612558 ZNF75AQ96N20 296 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 THAP7Q9BT49 309 aaPredicted RBP7.72□□□□□ -1.17
CCDC47-207ENST00000612558 CHST5Q9GZS9 411 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 TP63Q9H3D4 680 aaPredicted RBP7.72□□□□□ -1.17
CCDC47-207ENST00000612558 CNTD2Q9H8S5 307 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 TBC1D24Q9ULP9 559 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 MRPS7Q9Y2R9 242 aaKnown RBP7.72□□□□□ -1.17
CCDC47-207ENST00000612558 RHBDD3Q9Y3P4 386 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 SPTA1P02549 2419 aa7.72□□□□□ -1.17
CCDC47-207ENST00000612558 IGKV1-9A0A0C4DH69 117 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 TMEM272A0A1B0GTI8 110 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 hCG_38984A0A1B0GV85 526 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 LDLRAD4O15165 306 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 HCKP08631 526 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 CCL2P13500 99 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 CDK2P24941 298 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 ACKR3P25106 362 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 CEACAM8P31997 349 aaPredicted RBP7.71□□□□□ -1.17
CCDC47-207ENST00000612558 MNDAP41218 407 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 INPP1P49441 399 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 FAM3AP98173 230 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 MALLQ13021 153 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 ASAH1Q13510 395 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 OR8B8Q15620 311 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 TMEM69Q5SWH9 247 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 HACD4Q5VWC8 232 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 UNQ6494/PRO21346Q6UXR6 183 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 GFRALQ6UXV0 394 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 SSC4DQ8WTU2 575 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 RFT1Q96AA3 541 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 PHF21AQ96BD5 680 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 NKX3-1Q99801 234 aaPredicted RBP7.71□□□□□ -1.17
CCDC47-207ENST00000612558 OPN3Q9H1Y3 402 aaPredicted RBP7.71□□□□□ -1.17
CCDC47-207ENST00000612558 NEK6Q9HC98 313 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 DIABLOQ9NR28 239 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 CACNA1AO00555 2505 aa7.71□□□□□ -1.17
CCDC47-207ENST00000612558 ATMQ13315 3056 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 CHD8Q9HCK8 2581 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 XRCC3O43542 346 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 GSTZ1O43708 216 aaPredicted RBP7.71□□□□□ -1.18
CCDC47-207ENST00000612558 CTAG2O75638 210 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 BPNT1O95861 308 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF14P17017 642 aaPredicted RBP7.71□□□□□ -1.18
CCDC47-207ENST00000612558 RAB6AP20340 208 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 HOXC12P31275 282 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 PTH2RP49190 550 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 EFNB2P52799 333 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 MRPS10P82664 201 aaKnown RBP7.71□□□□□ -1.18
CCDC47-207ENST00000612558 PLA2G7Q13093 441 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 MRPL49Q13405 166 aaKnown RBP7.71□□□□□ -1.18
CCDC47-207ENST00000612558 TNK1Q13470 666 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 TAB1Q15750 504 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 UBE2V2Q15819 145 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms