RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PNLIPP16233 465 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 SPINK2P20155 84 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 DTX1Q86Y01 620 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 CCDC36Q8IYA8 594 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM230Q96A57 120 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 PIGMQ9H3S5 423 aa12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ZNF629Q9UEG4 869 aaPredicted RBP12.42□□□□□ -0.42
COL6A1-207ENST00000612273 LSM5Q9Y4Y9 91 aaKnown RBP12.42□□□□□ -0.42
COL6A1-207ENST00000612273 ISG15P05161 165 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 HIST1H1DP16402 221 aaKnown RBP12.41□□□□□ -0.42
COL6A1-207ENST00000612273 RRADP55042 308 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 OR2A2Q6IF42 318 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 OR5AS1Q8N127 324 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 SMRP1Q8NCR6 262 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 MFSD8Q8NHS3 518 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 DYRK2Q92630 601 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 S100A13Q99584 98 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 CMSS1Q9BQ75 279 aaKnown RBP12.41□□□□□ -0.42
COL6A1-207ENST00000612273 RBM24Q9BX46 236 aaKnown RBP12.41□□□□□ -0.42
COL6A1-207ENST00000612273 DOCK7Q96N67 2140 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 A0A1W2PR77 199 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 OR5H15A6NDH6 313 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 CCDC85CA6NKD9 419 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 H3BMH7 237 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 FCGR2AP12318 317 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 CBR1P16152 277 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 GALNSP34059 522 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 FXYD4P59646 89 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 TSPO2Q5TGU0 170 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 LPCAT3Q6P1A2 487 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 SLC25A45Q8N413 288 aa12.41□□□□□ -0.42
COL6A1-207ENST00000612273 NCOR1O75376 2440 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 MED6O75586 246 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 PIAS2O75928 621 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 BPNT1O95861 308 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 PATE4P0C8F1 98 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 SLC25A4P12235 298 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 ASCL1P50553 236 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 QRFPP83859 136 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 NKAIN1Q4KMZ8 207 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 IGKV1D-8A0A087WSZ0 117 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 IGKV1-9A0A0C4DH69 117 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 TEX13DA0A0J9YY54 714 aaPredicted RBP12.4□□□□□ -0.42
COL6A1-207ENST00000612273 NUDT21O43809 227 aaKnown RBP12.4□□□□□ -0.42
COL6A1-207ENST00000612273 IGHG1P01857 330 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 CD80P33681 288 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 GUCA1AP43080 201 aaPredicted RBP12.4□□□□□ -0.42
COL6A1-207ENST00000612273 TGIF1Q15583 401 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 HOGA1Q86XE5 327 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 OR4A4PQ8NGN8 299 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 OR13G1Q8NGZ3 307 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 OR2AE1Q8NHA4 323 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 ARL11Q969Q4 196 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 CDC6Q99741 560 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 C20orf24Q9BUV8 137 aa12.4□□□□□ -0.42
COL6A1-207ENST00000612273 LOC390937A0A1W2PQ73 354 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 ANKUB1A6NFN9 424 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 TPPPO94811 219 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF345Q14585 488 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 CHRFAM7AQ494W8 412 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 SVBPQ8N300 66 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 ZDHHC22Q8N966 263 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 EDAQ92838 391 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF501Q96CX3 271 aaPredicted RBP12.4□□□□□ -0.43
COL6A1-207ENST00000612273 FBXO17Q96EF6 278 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 GNRHR2Q96P88 292 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 GPR27Q9NS67 375 aa12.4□□□□□ -0.43
COL6A1-207ENST00000612273 TMEM14DPA8MWL7 114 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF17P17021 662 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 APOBEC1P41238 236 aaKnown RBP12.39□□□□□ -0.43
COL6A1-207ENST00000612273 KCNJ3P48549 501 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 SMAD4Q13485 552 aaKnown RBP12.39□□□□□ -0.43
COL6A1-207ENST00000612273 LYPD6Q86Y78 171 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 EIF4E3Q8N5X7 224 aaKnown RBP12.39□□□□□ -0.43
COL6A1-207ENST00000612273 KCNG3Q8TAE7 436 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 CNTNAP3BQ96NU0 1288 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 CRB3Q9BUF7 120 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 ZNF160Q9HCG1 818 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 FLVCR1Q9Y5Y0 555 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 TO15178 435 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 MELTFP08582 738 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 RAB6AP20340 208 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 SUPT4H1P63272 117 aaKnown RBP12.39□□□□□ -0.43
COL6A1-207ENST00000612273 KISS1Q15726 138 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 TAF9Q16594 264 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 IAH1Q2TAA2 248 aaPredicted RBP12.39□□□□□ -0.43
COL6A1-207ENST00000612273 CCDC157Q569K6 752 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 ANKRD37Q7Z713 158 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 RNF141Q8WVD5 230 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 OR10A2Q9H208 303 aa12.39□□□□□ -0.43
COL6A1-207ENST00000612273 PURGQ9UJV8 347 aaKnown RBP12.39□□□□□ -0.43
COL6A1-207ENST00000612273 ATG2AQ2TAZ0 1938 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 FAM230AA0A1W2PPH8 454 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 SPRY1O43609 319 aaPredicted RBP12.38□□□□□ -0.43
COL6A1-207ENST00000612273 SNAPC5O75971 98 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 IL2RAP01589 272 aa12.38□□□□□ -0.43
COL6A1-207ENST00000612273 TMEM225BP0DP42 221 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms