RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 Q8WTZ3 238 aa13.71□□□□□ -0.21
RER1-209ENST00000605895 MRPL24Q96A35 216 aaKnown RBP13.71□□□□□ -0.21
RER1-209ENST00000605895 CTHRC1Q96CG8 243 aa13.71□□□□□ -0.21
RER1-209ENST00000605895 CDC6Q99741 560 aa13.71□□□□□ -0.21
RER1-209ENST00000605895 WFDC1Q9HC57 220 aa13.71□□□□□ -0.21
RER1-209ENST00000605895 CRTAPO75718 401 aaPredicted RBP13.71□□□□□ -0.22
RER1-209ENST00000605895 ADH1CP00326 375 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 SMIM10L1P0DMW3 83 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 IGFBP3P17936 291 aaPredicted RBP13.71□□□□□ -0.22
RER1-209ENST00000605895 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.22
RER1-209ENST00000605895 ANOS1P23352 680 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 OR3A4PP47883 348 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 SLC6A9P48067 706 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 NHLH2Q02577 135 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 WBP2NLQ6ICG8 309 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 KCTD18Q6PI47 426 aaPredicted RBP13.71□□□□□ -0.22
RER1-209ENST00000605895 FAM180AQ6UWF9 173 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 SUMF2Q8NBJ7 301 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 SMIM10Q96HG1 83 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 GPER1Q99527 375 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 FAM60AQ9NP50 221 aa13.71□□□□□ -0.22
RER1-209ENST00000605895 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.71□□□□□ -0.22
RER1-209ENST00000605895 SLC31A2O15432 143 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 IGFALSP35858 605 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 NOVA1P51513 510 aaKnown RBP13.7□□□□□ -0.22
RER1-209ENST00000605895 TMEM268Q5VZI3 342 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 PRSS58Q8IYP2 241 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 TAAR9Q96RI9 348 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 PRSS37A4D1T9 235 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BKO60814 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 TMEM127O75204 238 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 NXPH3O95157 252 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 F10P00742 488 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BJP06899 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BOP23527 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BBP33778 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BDP58876 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 ERVFRD-1P60508 538 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BCP62807 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 CST6Q15828 149 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST2H2BEQ16778 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.7□□□□□ -0.22
RER1-209ENST00000605895 OR2T2Q6IF00 324 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HEPN1Q6WQI6 88 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 CPEB2Q7Z5Q1 589 aaKnown RBP13.7□□□□□ -0.22
RER1-209ENST00000605895 WDFY1Q8IWB7 410 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 OR1E3Q8WZA6 343 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BHQ93079 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BNQ99877 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 HIST1H2BMQ99879 126 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 EMC6Q9BV81 110 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 ZNF700Q9H0M5 742 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 ZBP1Q9H171 429 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 RAB18Q9NP72 206 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 C19orf12Q9NSK7 152 aa13.7□□□□□ -0.22
RER1-209ENST00000605895 TDRD6O60522 2096 aaKnown RBP13.7□□□□□ -0.22
RER1-209ENST00000605895 IGKV1D-43A0A0B4J1Z2 117 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 CXorf51AA0A1B0GTR3 108 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 ZNF878C9JN71 531 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 HOXC4P09017 264 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 ZFP62Q8NB50 900 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 C8orf44Q96CB5 159 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 FAM71F1Q96KD3 344 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 OR5B2Q96R09 309 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 GPX7Q96SL4 187 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 NUDT22Q9BRQ3 303 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 RHBDD3Q9Y3P4 386 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 ZNF705GA8MUZ8 300 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 PPP1R2P9O14990 202 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 SYT7O43581 403 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 ZNF823P16415 610 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 ZNF93P35789 620 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 ZNF385CQ66K41 422 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 TMEM156Q8N614 296 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 NT5CQ8TCD5 201 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 TM4SF19Q96DZ7 209 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 ASB16Q96NS5 453 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 LANCL2Q9NS86 450 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 FAM212BQ9NTI7 297 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 HRASLS2Q9NWW9 162 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 STARD10Q9Y365 291 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 HDGFL3Q9Y3E1 203 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 B3GALT1Q9Y5Z6 326 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 MASP2O00187 686 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 CRABP1P29762 137 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 RBMXP38159 391 aaKnown RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 ZNF141Q15928 474 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 TEX30Q5JUR7 227 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 ZNF610Q8N9Z0 462 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 OR51E1Q8TCB6 317 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 HDHD3Q9BSH5 251 aaPredicted RBP13.69□□□□□ -0.22
RER1-209ENST00000605895 OR8D2Q9GZM6 311 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 SLC35B3Q9H1N7 401 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 OR10A5Q9H207 317 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 TUBA4BQ9H853 241 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 MED29Q9NX70 200 aa13.69□□□□□ -0.22
RER1-209ENST00000605895 SHANK1Q9Y566 2161 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms