RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
TUBE1-208ENST00000604743 ROM1Q03395 351 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 MFGE8Q08431 387 aaPredicted RBP12.07□□□□□ -0.48
TUBE1-208ENST00000604743 PRDX4Q13162 271 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 OR8B8Q15620 311 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 ZNF404Q494X3 552 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 LYPD2Q6UXB3 125 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 KCTD8Q6ZWB6 473 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 SSX6Q7RTT6 188 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 PQLC1Q8N2U9 271 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 OR10H4Q8NGA5 316 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 OR51E1Q8TCB6 317 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 STMN2Q93045 179 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
TUBE1-208ENST00000604743 MNTQ99583 582 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 SLC29A1Q99808 456 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 TMPRSS13Q9BYE2 586 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 C7orf69Q9H7B7 122 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 MMP26Q9NRE1 261 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 HAO2Q9NYQ3 351 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 MIOXQ9UGB7 285 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
TUBE1-208ENST00000604743 FBN1P35555 2871 aaKnown RBP12.07□□□□□ -0.48
TUBE1-208ENST00000604743 ANXA2P2A6NMY6 339 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 F5H0A9 414 aaPredicted RBP12.06□□□□□ -0.48
TUBE1-208ENST00000604743 LOC110117498-PIK3R3F6TDL0 507 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 TRAPPC2LH3BP13 241 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 GNB2P62879 340 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 CSNK2BP67870 215 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 POU4F2Q12837 409 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 SNCBQ16143 134 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 C1orf229Q6ZS94 237 aaPredicted RBP12.06□□□□□ -0.48
TUBE1-208ENST00000604743 ZBTB49Q6ZSB9 765 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 THAP5Q7Z6K1 395 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 WDR86Q86TI4 376 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 YIPF7Q8N8F6 280 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 PLPP7Q8NBV4 271 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 OR1M1Q8NGA1 313 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 OR8B3Q8NGG8 313 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 RFKQ969G6 155 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 NEIL1Q96FI4 390 aaPredicted RBP12.06□□□□□ -0.48
TUBE1-208ENST00000604743 HRASLS5Q96KN8 279 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 OR8B2Q96RD0 313 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 MBOAT4Q96T53 435 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 MICU1Q9BPX6 476 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 GPR84Q9NQS5 396 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 AASSQ9UDR5 926 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 MRM2Q9UI43 246 aaKnown RBP12.06□□□□□ -0.48
TUBE1-208ENST00000604743 ZNF391Q9UJN7 358 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 GMPPBQ9Y5P6 360 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 MPC1Q9Y5U8 109 aa12.06□□□□□ -0.48
TUBE1-208ENST00000604743 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 A0A1W2PQL4 384 aaPredicted RBP12.05□□□□□ -0.48
TUBE1-208ENST00000604743 ACOD1A6NK06 481 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 RNF212BA8MTL3 300 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 LGALS8O00214 317 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 ENTPD6O75354 484 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 PTBP3O95758 552 aaKnown RBP12.05□□□□□ -0.48
TUBE1-208ENST00000604743 KRT8P05787 483 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 OR2T7P0C7T2 308 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 EGR1P18146 543 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 DCTDP32321 178 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 MAP2K3P46734 347 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 GMFBP60983 142 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 IL5RAQ01344 420 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 EGR3Q06889 387 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 ZNF154Q13106 437 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 ODF4Q2M2E3 257 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 DMRTC1Q5HYR2 192 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 BCL2L15Q5TBC7 163 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 NLRC3Q7RTR2 1065 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 OR2T27Q8NH04 317 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 LRRC29Q8WV35 223 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 TRUB1Q8WWH5 349 aaKnown RBP12.05□□□□□ -0.48
TUBE1-208ENST00000604743 RNF170Q96K19 258 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 HIST1H2AAQ96QV6 131 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 RTL8AQ9BWD3 113 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 SSBP3Q9BWW4 388 aaPredicted RBP12.05□□□□□ -0.48
TUBE1-208ENST00000604743 OR5V1Q9UGF6 321 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 NUFIP1Q9UHK0 495 aaKnown RBP12.05□□□□□ -0.48
TUBE1-208ENST00000604743 OR52A1Q9UKL2 312 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 LRCH1Q9Y2L9 728 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 R4GMQ9 66 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 COL6A5A8TX70 2615 aa12.05□□□□□ -0.48
TUBE1-208ENST00000604743 IGHV3OR15-7A0A075B7D8 119 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 ZNF816-ZNF321PA0A0X1KG74 233 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 OOEPA6NGQ2 149 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 H3BSH0 61 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 J3QLI3 93 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 CDIPTO14735 213 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 SRSF10O75494 262 aaKnown RBP12.04□□□□□ -0.48
TUBE1-208ENST00000604743 RGS9O75916 674 aaPredicted RBP12.04□□□□□ -0.48
TUBE1-208ENST00000604743 CST4P01036 141 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 GYPAP02724 150 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 TTRP02766 147 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 GATA3P23771 443 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 THBS2P35442 1172 aa12.04□□□□□ -0.48
TUBE1-208ENST00000604743 PITPNBP48739 271 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms