RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 REEP6Q96HR9 211 aa13.16□□□□□ -0.3
CCDC12-211ENST00000604367 CYYR1Q96J86 154 aa13.16□□□□□ -0.3
CCDC12-211ENST00000604367 SPOCK3Q9BQ16 436 aa13.16□□□□□ -0.3
CCDC12-211ENST00000604367 CHST5Q9GZS9 411 aa13.16□□□□□ -0.3
CCDC12-211ENST00000604367 ZNF552Q9H707 407 aaPredicted RBP13.16□□□□□ -0.3
CCDC12-211ENST00000604367 ASCL3Q9NQ33 180 aa13.16□□□□□ -0.3
CCDC12-211ENST00000604367 ZNF736B4DX44 427 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-211ENST00000604367 CRTAPO75718 401 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-211ENST00000604367 CD82P27701 267 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 FOXG1P55316 489 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ZNF766Q5HY98 468 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 RNFT1Q5M7Z0 435 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 C1QL2Q7Z5L3 287 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 TRAPPC6BQ86SZ2 158 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ZNF584Q8IVC4 421 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ZFP62Q8NB50 900 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-211ENST00000604367 OR10R2Q8NGX6 335 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 LPAR5Q9H1C0 372 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 WNT5BQ9H1J7 359 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 EMC3Q9P0I2 261 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ZFHX2Q9C0A1 2572 aaPredicted RBP13.15□□□□□ -0.3
CCDC12-211ENST00000604367 DOCK7Q96N67 2140 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 A0A0A6YYD4 124 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 FAM172BPA6NC97 362 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 OR6C6A6NF89 314 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 CDC14BO60729 498 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 FARS2O95363 451 aaKnown RBP13.15□□□□□ -0.3
CCDC12-211ENST00000604367 AMY2AP04746 511 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ACKR3P25106 362 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 RRADP55042 308 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ZP1P60852 638 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 PNLDC1Q8NA58 520 aaKnown RBP13.15□□□□□ -0.3
CCDC12-211ENST00000604367 TMEM229BQ8NBD8 167 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 TMEM59Q9BXS4 323 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 GPR173Q9NS66 373 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ZNF224Q9NZL3 707 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 ING4Q9UNL4 249 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 LAMA5O15230 3695 aa13.15□□□□□ -0.3
CCDC12-211ENST00000604367 SOCS1O15524 211 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 ZNHIT1O43257 154 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 VSIG10L2P0DP72 767 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 FCGR2AP12318 317 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 WT1P19544 449 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-211ENST00000604367 ARF1P84077 181 aaKnown RBP13.14□□□□□ -0.31
CCDC12-211ENST00000604367 PMP22Q01453 160 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 TNK1Q13470 666 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 NKPD1Q17RQ9 610 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 OR52W1Q6IF63 320 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 CD163Q86VB7 1156 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 LIX1LQ8IVB5 337 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 FAM109AQ8N4B1 249 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 ASCC1Q8N9N2 400 aaKnown RBP13.14□□□□□ -0.31
CCDC12-211ENST00000604367 SEMA6DQ8NFY4 1073 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 OR10K1Q8NGX5 313 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 ZFAND1Q8TCF1 268 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 SSC4DQ8WTU2 575 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 PP6455Q8WZ26 134 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 ELL3Q9HB65 397 aaPredicted RBP13.14□□□□□ -0.31
CCDC12-211ENST00000604367 PARPBPQ9NWS1 579 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 AKR7A2O43488 359 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 PTGFRP43088 359 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 PCBD1P61457 104 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 SCGB2B2Q4G0G5 96 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 PABPC1L2AQ5JQF8 200 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 CRIP3Q6Q6R5 217 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 IDO2Q6ZQW0 420 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 SLC7A5P1Q8MH63 180 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 TNFAIP8L1Q8WVP5 186 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 HAS2Q92819 552 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 HYLS1Q96M11 299 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 CHIAQ9BZP6 476 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF292O60281 2723 aa13.14□□□□□ -0.31
CCDC12-211ENST00000604367 MEIKINA0A087WXM9 373 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 CREBL2O60519 120 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 MMP7P09237 267 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 LIPCP11150 499 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 PRF1P14222 555 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 CCNOP22674 350 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 OR2W3Q7Z3T1 314 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 CDH24Q86UP0 819 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 CDH26Q8IXH8 852 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 FDCSPQ8NFU4 85 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 CHST6Q9GZX3 395 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 GPN1Q9HCN4 374 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 UPB1Q9UBR1 384 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 FBLN5Q9UBX5 448 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 SPENQ96T58 3664 aaKnown RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 PRR33A8MZF0 331 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 RGS13O14921 159 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 LRP3O75074 770 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 GSTT2P0CG29 244 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 SERPINA2P20848 420 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 UBE2MP61081 183 aaKnown RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 MCEMP1Q8IX19 187 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms