RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 OR4D2P58180 307 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 HGFACQ04756 655 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 HERPUD1Q15011 391 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SPDYE7PQ495Y7 208 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 OCIAD2Q56VL3 154 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 LAIR1Q6GTX8 287 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 LRRTM1Q86UE6 522 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TMEM161BQ8NDZ6 487 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 OR52B6Q8NGF0 335 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 OR4D5Q8NGN0 318 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SFXN5Q8TD22 340 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 HPSE2Q8WWQ2 592 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 DYRK2Q92630 601 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 TOMM40LQ969M1 308 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 FLYWCH2Q96CP2 140 aaKnown RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 DYNLL2Q96FJ2 89 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 GPR78Q96P69 363 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ARV1Q9H2C2 271 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SEC61A2Q9H9S3 476 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 DOK5Q9P104 306 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 SS18L2Q9UHA2 77 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 ANGPT4Q9Y264 503 aa4.42□□□□□ -1.7
SPTBN1-206ENST00000602898 KIR2DL5BA0A0G2JN68 375 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 KIR2DL5BA0A0G2JPC4 375 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 PROB1E7EW31 1015 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 F6UZH7 168 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR7A17O14581 309 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 SSNA1O43805 119 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 CDC40O60508 579 aaKnown RBP eCLIP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 C1QCP02747 245 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 HIST1H2ABP04908 130 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 ARG1P05089 322 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 RHOCP08134 193 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 LIPCP11150 499 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 TDGF1P13385 188 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 HOXB2P14652 356 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 HOXB6P17509 224 aaKnown RBP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 MAKP20794 623 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 MPGP29372 298 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 SRD5A2P31213 254 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 BDKRB1P46663 353 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 GLRBP48167 497 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 NXPH1P58417 271 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 CCL7P80098 99 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 ST3GAL2Q16842 350 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 GSG1Q2KHT4 349 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 PHLDA2Q53GA4 152 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 SYPL2Q5VXT5 272 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 LINGO4Q6UY18 593 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 HIST3H2AQ7L7L0 130 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM220AQ7Z4H9 259 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 PIM3Q86V86 326 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 COMMD2Q86X83 199 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 XYLT1Q86Y38 959 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 SLC30A8Q8IWU4 369 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 KIR2DL5AQ8N109 375 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR4A4PQ8NGN8 299 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR1B1Q8NGR6 318 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 MRAPQ8TCY5 172 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 HIST1H2ACQ93077 130 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 RPUSD4Q96CM3 377 aaKnown RBP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 RAB39BQ96DA2 213 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 LMLNQ96KR4 655 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR2V2Q96R30 315 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 TAPBPLQ9BX59 468 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 ARL6Q9H0F7 186 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 SRMSQ9H3Y6 488 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 CBLN4Q9NTU7 201 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 POLDIP2Q9Y2S7 368 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 WDR45Q9Y484 360 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 PCYT1BQ9Y5K3 369 aaPredicted RBP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 STYXL1Q9Y6J8 313 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 FAM181BA6NEQ2 426 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 G3V3Y1 287 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 K7ERU9 68 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 EIF4E2O60573 245 aaKnown RBP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 WNT11O96014 354 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 KLK1P06870 262 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 UCHL1P09936 223 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 OR5AC1P0C628 307 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 DANCRP0C864 163 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 GZMBP10144 247 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 CCKBRP32239 447 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 DUTP33316 252 aaKnown RBP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 MAGEA12P43365 314 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 DNASE1L1P49184 302 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 SELENOPP49908 381 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 RAB7AP51149 207 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 NDUFA6P56556 154 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 C1orf61Q13536 156 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 EXOSC7Q15024 291 aaKnown RBP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 HMGN3Q15651 99 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 VMACQ2NL98 169 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 PRTGQ2VWP7 1150 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 STEAP4Q687X5 459 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 ZNF57Q68EA5 555 aaPredicted RBP4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 IL34Q6ZMJ4 242 aa4.41□□□□□ -1.7
SPTBN1-206ENST00000602898 TRMT1LQ7Z2T5 733 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms