RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 SPATA24Q86W54 205 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 FAM90A1Q86YD7 464 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 CPOQ8IVL8 374 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 GALNT4Q8N4A0 578 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 OR1M1Q8NGA1 313 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 THEM6Q8WUY1 208 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 NRBF2Q96F24 287 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 DMRTB1Q96MA1 342 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 ZNF747Q9BV97 191 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 TLNRD1Q9H1K6 362 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 DNAJC27Q9NZQ0 273 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 KIF17Q9P2E2 1029 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 ZNF319Q9P2F9 582 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 MPC1Q9Y5U8 109 aa13.12□□□□□ -0.31
VRK3-221ENST00000600284 IGHV3OR16-10A0A075B7F0 116 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 ANXA2P2A6NMY6 339 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 FKBP6O75344 327 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 GYPAP02724 150 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 PRKACGP22612 351 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 HOXA4Q00056 320 aaPredicted RBP13.11□□□□□ -0.31
VRK3-221ENST00000600284 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 WDR86Q86TI4 376 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 C12orf43Q96C57 262 aaKnown RBP13.11□□□□□ -0.31
VRK3-221ENST00000600284 SLC7A6OSQ96CW6 309 aaPredicted RBP13.11□□□□□ -0.31
VRK3-221ENST00000600284 DUX5Q96PT3 197 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 MICU1Q9BPX6 476 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 NOX4Q9NPH5 578 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 POMPQ9Y244 141 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 RHBDD3Q9Y3P4 386 aa13.11□□□□□ -0.31
VRK3-221ENST00000600284 ACOD1A6NK06 481 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 SELENOFO60613 162 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
VRK3-221ENST00000600284 TOX4O94842 621 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 CST4P01036 141 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 MMP9P14780 707 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 EGR1P18146 543 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 ALOX5APP20292 161 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 SLC2A5P22732 501 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 IL13RA1P78552 427 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 GFOD2Q3B7J2 385 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 C16orf87Q6PH81 154 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 DEGS2Q6QHC5 323 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 SHISA2Q6UWI4 295 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 WDR82Q6UXN9 313 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 HS3ST5Q8IZT8 346 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 LRRC29Q8WV35 223 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 ITPKCQ96DU7 683 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 WDFY2Q96P53 400 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 RTL8AQ9BWD3 113 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 PAPOLGQ9BWT3 736 aaKnown RBP13.1□□□□□ -0.31
VRK3-221ENST00000600284 YIPF3Q9GZM5 350 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 SMURF1Q9HCE7 757 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 BRD7Q9NPI1 651 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 FAM53CQ9NYF3 392 aa13.1□□□□□ -0.31
VRK3-221ENST00000600284 TMEM210A6NLX4 147 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 POM121CA8CG34 1229 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 SRRM5B3KS81 715 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 DVL1O14640 695 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 GPR37O15354 613 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 TMPRSS2O15393 492 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
VRK3-221ENST00000600284 RPS7P62081 194 aaKnown RBP13.09□□□□□ -0.31
VRK3-221ENST00000600284 PDCD1Q15116 288 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 SNAPC1Q16533 368 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 DEFB112Q30KQ8 113 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 ATPAF1Q5TC12 328 aaPredicted RBP13.09□□□□□ -0.31
VRK3-221ENST00000600284 METTL11BQ5VVY1 283 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 KCTD18Q6PI47 426 aaPredicted RBP13.09□□□□□ -0.31
VRK3-221ENST00000600284 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 SLC36A1Q7Z2H8 476 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 OR10Z1Q8NGY1 313 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 ZDHHC16Q969W1 377 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 TEAD3Q99594 435 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 PCGF1Q9BSM1 259 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 DNTTIP1Q9H147 329 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 RASSF4Q9H2L5 321 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 LAMP5Q9UJQ1 280 aa13.09□□□□□ -0.31
VRK3-221ENST00000600284 SOX21Q9Y651 276 aaPredicted RBP13.09□□□□□ -0.31
VRK3-221ENST00000600284 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 CDIPTO14735 213 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 DCTDP32321 178 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 CRISP1P54107 249 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 PRDX4Q13162 271 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 TMEM236Q5W0B7 351 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 BRD3OSQ6XYD6 125 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 Q6YL49 198 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 KRT77Q7Z794 578 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 TMEM86BQ8N661 226 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 BBS1Q8NFJ9 593 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 GATAD2BQ8WXI9 593 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 OR5P3Q8WZ94 311 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 FAM71F1Q96KD3 344 aaPredicted RBP13.08□□□□□ -0.32
VRK3-221ENST00000600284 TBX15Q96SF7 602 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 SIRPDQ9H106 197 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 CNTD2Q9H8S5 307 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms