RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 HSD17B1P14061 328 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 TGM4P49221 684 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 BLVRAP53004 296 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 ATPAF1Q5TC12 328 aaPredicted RBP17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4L9Q6RFH8 374 aaPredicted RBP17.37■□□□□ 0.37
PNKP-212ENST00000599454 C1orf122Q6ZSJ8 110 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 FGFRL1Q8N441 504 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 FAM216BQ8N7L0 139 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 CSNK2A3Q8NEV1 391 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 FAM110DQ8TAY7 271 aaPredicted RBP17.37■□□□□ 0.37
PNKP-212ENST00000599454 NSMCE2Q96MF7 247 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 TLNRD1Q9H1K6 362 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4Q9UBX2 424 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 RNASEK-C17orf49H0YIS7 233 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 PAHP00439 452 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 CSF1P09603 554 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 GNALP38405 381 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 CX3CR1P49238 355 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 SLC25A1P53007 311 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 EGR3Q06889 387 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 STUMQ69YW2 141 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 C1QL4Q86Z23 238 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 FTMTQ8N4E7 242 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 OR52H1Q8NGJ2 320 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 OR9Q1Q8NGQ5 310 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 REEP6Q96HR9 211 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 SEMA6AQ9H2E6 1030 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 FBLN5Q9UBX5 448 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 BAIAP2Q9UQB8 552 aa17.36■□□□□ 0.37
PNKP-212ENST00000599454 hCG_38984A0A1B0GV85 526 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 ANKRD61A6NGH8 418 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 ACOT8O14734 319 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 ANXA2P07355 339 aaKnown RBP17.35■□□□□ 0.37
PNKP-212ENST00000599454 HSD11B1P28845 292 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 HMGA2P52926 109 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 CSNK2BP67870 215 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 IL5RAQ01344 420 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 ACSM1Q08AH1 577 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 NCR3LG1Q68D85 454 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 RASSF6Q6ZTQ3 369 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 Q8N7P7 452 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 ZNF511Q8NB15 262 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 OR10Z1Q8NGY1 313 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 SGK3Q96BR1 496 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 MICU1Q9BPX6 476 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 NMNAT2Q9BZQ4 307 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 MYLK2Q9H1R3 596 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 ABCB9Q9NP78 766 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 HAO2Q9NYQ3 351 aa17.35■□□□□ 0.37
PNKP-212ENST00000599454 DHRS12A0PJE2 317 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 NKX6-3A6NJ46 265 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 ANXA2P2A6NMY6 339 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 CDIPTO14735 213 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 SPI1P17947 270 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 UBE2E1P51965 193 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 ELF3P78545 371 aaPredicted RBP17.34■□□□□ 0.37
PNKP-212ENST00000599454 IKZF1Q13422 519 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 SAMD4BQ5PRF9 694 aaKnown RBP17.34■□□□□ 0.37
PNKP-212ENST00000599454 C11orf88Q6PI97 169 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 TNFRSF14Q92956 283 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 PAPOLGQ9BWT3 736 aaKnown RBP17.34■□□□□ 0.37
PNKP-212ENST00000599454 RGCCQ9H4X1 137 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 TBC1D23Q9NUY8 699 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 DNAJB11Q9UBS4 358 aa17.34■□□□□ 0.37
PNKP-212ENST00000599454 MEIOCA2RUB1 952 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 TMEM210A6NLX4 147 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 M0R1W7 72 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 ARPC2O15144 300 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 AMY2BP19961 511 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 SAA4P35542 130 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 GSK3AP49840 483 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 CRMP1Q14194 572 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 EIF2B1Q14232 305 aaKnown RBP17.33■□□□□ 0.36
PNKP-212ENST00000599454 HERPUD1Q15011 391 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 Q6ZTK2 550 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 PRSS45Q7RTY3 260 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 OR9Q2Q8NGE9 314 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 OR8D4Q8NGM9 314 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 OR6K6Q8NGW6 343 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 RNF133Q8WVZ7 376 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 H1FXQ92522 213 aaKnown RBP17.33■□□□□ 0.36
PNKP-212ENST00000599454 ITPKCQ96DU7 683 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 MED30Q96HR3 178 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 RAB3IPQ96QF0 476 aaPredicted RBP17.33■□□□□ 0.36
PNKP-212ENST00000599454 BTBD10Q9BSF8 475 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 RTL8AQ9BWD3 113 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 OR10A2Q9H208 303 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 METTL8Q9H825 291 aaKnown RBP17.33■□□□□ 0.36
PNKP-212ENST00000599454 MPC1Q9Y5U8 109 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 LYVE1Q9Y5Y7 322 aa17.33■□□□□ 0.36
PNKP-212ENST00000599454 NOTCH3Q9UM47 2321 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 TNFRSF11BO00300 401 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 IFNGP01579 166 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 GYPBP06028 91 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 GABRA5P31644 462 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 FBLN7Q53RD9 439 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 SLC35E4Q6ICL7 350 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 ZNF788Q6ZQV5 615 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 FAM57BQ71RH2 274 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 BEND2Q8NDZ0 799 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms