RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 H3BSA7 217 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 H3BSH0 61 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 AIREO43918 545 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 FAM157CP0CG43 387 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 ZNF20P17024 532 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 GCH1P30793 250 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 ZNF92Q03936 586 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 CHRFAM7AQ494W8 412 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 Q499Y3 187 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 SPATA46Q5T0L3 261 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 RGS7BPQ6MZT1 257 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 ADAM5Q6NVV9 412 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 RDH10Q8IZV5 341 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 OR13C5Q8NGS8 318 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 RGP1Q92546 391 aaPredicted RBP10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 SPSB4Q96A44 273 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 SGK3Q96BR1 496 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 PIK3IP1Q96FE7 263 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 CHCHD6Q9BRQ6 235 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 STARD10Q9Y365 291 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 SF3B6Q9Y3B4 125 aaKnown RBP10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 RNF115Q9Y4L5 304 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 ATP23Q9Y6H3 246 aa10.34□□□□□ -0.75
SHKBP1-213ENST00000597325 hCG_38984A0A1B0GV85 526 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 SMIM31A0A1B0GVY4 71 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 GGT3PA6NGU5 568 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF879B4DU55 563 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 GABRPO00591 440 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 GATBO75879 557 aaKnown RBP10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 DHRS3O75911 302 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 IGLV3-1P01715 115 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 SELEP16581 610 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 CCL1P22362 96 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 GALP22466 123 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 ANOS1P23352 680 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 MAP2K3P46734 347 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 SOX2P48431 317 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 ERVS71-1P61550 626 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 FABP5Q01469 135 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 GK2Q14410 553 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 HLXQ14774 488 aaPredicted RBP10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF718Q3SXZ3 478 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 ACSM3Q53FZ2 586 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 VHLLQ6RSH7 139 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 FTMTQ8N4E7 242 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 NUP37Q8NFH4 326 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 SEMA6DQ8NFY4 1073 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 OR51A4Q8NGJ6 313 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 OR10AC1Q8NH08 325 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 SLC25A40Q8TBP6 338 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 RAB2BQ8WUD1 216 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 ITFG2Q969R8 447 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 TMEM106AQ96A25 262 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 LYZL4Q96KX0 146 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 OR14A2Q96R54 314 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 GSX2Q9BZM3 304 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 OR2J1Q9GZK6 312 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 OR51E2Q9H255 320 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 POFUT1Q9H488 388 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 BATF3Q9NR55 127 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 NDUFA13Q9P0J0 144 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 CKLFQ9UBR5 152 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 ENPP5Q9UJA9 477 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 GSTK1Q9Y2Q3 226 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 CR1P17927 2039 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 CMYA5Q8N3K9 4069 aa10.33□□□□□ -0.76
SHKBP1-213ENST00000597325 TRBV5-5A0A0J9YX44 114 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 A0A1B0GTI1 187 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 TRDV1A0A1B0GX56 115 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 DHRS7CA6NNS2 312 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 VSTM5A8MXK1 200 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 DEFB108AA8MXU0 73 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 ARL6IP5O75915 188 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 GABARAPO95166 117 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 RAC2P15153 192 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 MYL9P24844 172 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 GLRXP35754 106 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 GNALP38405 381 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 CRYBB2P43320 205 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 GSK3AP49840 483 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 SELENOVP59797 346 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 RPS11P62280 158 aaKnown RBP eCLIP10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 ZMAT1Q5H9K5 638 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 FBXW12Q6X9E4 464 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 GDPGP1Q6ZNW5 385 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 ANKRD13BQ86YJ7 626 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 PLPP7Q8NBV4 271 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 CSNK2A3Q8NEV1 391 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 KBTBD8Q8NFY9 601 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF420Q8TAQ5 688 aaPredicted RBP10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 PHYHIPQ92561 330 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 DERL3Q96Q80 235 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 CA10Q9NS85 328 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 PIGLQ9Y2B2 252 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 V9GYS6 101 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 RYR3Q15413 4870 aa10.32□□□□□ -0.76
SHKBP1-213ENST00000597325 DSCAMO60469 2012 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms