RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 THBS2P35442 1172 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 LIPAP38571 399 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 CRYBB2P43320 205 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 ART1P52961 327 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 GP2P55259 537 aaKnown RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 ATP5J2P56134 94 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 WNT4P56705 351 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 SELENOVP59797 346 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 EMX1Q04741 257 aaPredicted RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 RIN1Q13671 783 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 MPPED2Q15777 294 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 UBE2V2Q15819 145 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 MOGQ16653 247 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 TSTQ16762 297 aaKnown RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 CCDC58Q4VC31 144 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 FAM209AQ5JX71 171 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 RPL22L1Q6P5R6 122 aaKnown RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 PRSS57Q6UWY2 283 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 SPARTQ8N0X7 666 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 ZNF525Q8N782 197 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 OR2Z1Q8NG97 314 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 OR13G1Q8NGZ3 307 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 NEU4Q8WWR8 484 aaPredicted RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 OR5P3Q8WZ94 311 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 MYDGFQ969H8 173 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 MEGF10Q96KG7 1140 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 OPA3Q9H6K4 179 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 CYSLTR2Q9NS75 346 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 GPR160Q9UJ42 338 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 FBXO9Q9UK97 447 aaPredicted RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 ZDHHC8Q9ULC8 765 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 SF3B6Q9Y3B4 125 aaKnown RBP8.94□□□□□ -0.98
LIG1-210ENST00000596332 ARID1AO14497 2285 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 ITPR3Q14573 2671 aa8.94□□□□□ -0.98
LIG1-210ENST00000596332 CELSR1Q9NYQ6 3014 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 IGHV3-64DA0A0J9YX35 117 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 TRBV5-5A0A0J9YX44 114 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 TRIM64CA6NLI5 447 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ZNF850A8MQ14 1090 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 C3orf80F5H4A9 247 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 SSX4O60224 188 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 GMDSO60547 372 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 CD1AP06126 327 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 MYL12AP19105 171 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 CFL1P23528 166 aaKnown RBP8.93□□□□□ -0.98
LIG1-210ENST00000596332 CD200P41217 278 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 GATA4P43694 442 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 MAP2K3P46734 347 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 GBX2P52951 348 aaPredicted RBP8.93□□□□□ -0.98
LIG1-210ENST00000596332 GABARAPL2P60520 117 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 MRPL28Q13084 256 aaKnown RBP8.93□□□□□ -0.98
LIG1-210ENST00000596332 SPHARQ15513 63 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ZBTB37Q5TC79 503 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 TMEM244Q5VVB8 128 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ZNF529Q6P280 563 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 TMPRSS11AQ6ZMR5 421 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 DOK3Q7L591 496 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 FAM220AQ7Z4H9 259 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 SEMA6DQ8NFY4 1073 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 OR13C5Q8NGS8 318 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 C10orf105Q8TEF2 133 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ITLN1Q8WWA0 313 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 GHSRQ92847 366 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ITFG2Q969R8 447 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ELMOD3Q96FG2 381 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 TRMT61AQ96FX7 289 aaKnown RBP8.93□□□□□ -0.98
LIG1-210ENST00000596332 OPALINQ96PE5 141 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 OR2V2Q96R30 315 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 RAB1BQ9H0U4 201 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 Q9H521 79 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 GCM1Q9NP62 436 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 DYNLRB1Q9NP97 96 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ACOT13Q9NPJ3 140 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 ZNF275Q9NSD4 429 aaPredicted RBP8.93□□□□□ -0.98
LIG1-210ENST00000596332 IL19Q9UHD0 177 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 GTF2A1LQ9UNN4 478 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 PIGLQ9Y2B2 252 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 HIVEP1P15822 2718 aa8.93□□□□□ -0.98
LIG1-210ENST00000596332 IGKV1-27A0A075B6S5 117 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 IGHV4-30-2A0A087WSY4 118 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 TRBV2A0A0J9YWF9 115 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 DHRS7CA6NNS2 312 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 WNT9BO14905 357 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 PIN1P1O15428 100 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 SYT7O43581 403 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 MRPS14O60783 128 aaKnown RBP8.92□□□□□ -0.98
LIG1-210ENST00000596332 SC5DO75845 299 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 UBCP0CG48 685 aaKnown RBP8.92□□□□□ -0.98
LIG1-210ENST00000596332 BMP4P12644 408 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 DAOP14920 347 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 ACHEP22303 614 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 GIFP27352 417 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 MRPS11P82912 194 aaKnown RBP8.92□□□□□ -0.98
LIG1-210ENST00000596332 TNFAIP6P98066 277 aaPredicted RBP8.92□□□□□ -0.98
LIG1-210ENST00000596332 BDH1Q02338 343 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 PRDX4Q13162 271 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 TPBGQ13641 420 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 INSL4Q14641 139 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 TBCEQ15813 527 aaPredicted RBP8.92□□□□□ -0.98
LIG1-210ENST00000596332 SSX1Q16384 188 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms