RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 MTRF1O75570 445 aaKnown RBP15.36■□□□□ 0.05
ZNF558-204ENST00000596172 IGHA1P01876 353 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 CPT2P23786 658 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 GNALP38405 381 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 CAPGP40121 348 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 RIPPLY3P57055 190 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 BTG1P62324 171 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 KLHL22Q53GT1 634 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 CATSPERDQ86XM0 798 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 SEMA6DQ8NFY4 1073 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 OR11L1Q8NGX0 322 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 OR8S1Q8NH09 359 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 ZNF420Q8TAQ5 688 aaPredicted RBP15.36■□□□□ 0.05
ZNF558-204ENST00000596172 RAB39BQ96DA2 213 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 MRPL48Q96GC5 212 aaKnown RBP15.36■□□□□ 0.05
ZNF558-204ENST00000596172 ADI1Q9BV57 179 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 PAPOLGQ9BWT3 736 aaKnown RBP15.36■□□□□ 0.05
ZNF558-204ENST00000596172 NARFLQ9H6Q4 476 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 ZNF665Q9H7R5 613 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 FN3KRPQ9HA64 309 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 AMBNQ9NP70 447 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 YAE1D1Q9NRH1 226 aa15.36■□□□□ 0.05
ZNF558-204ENST00000596172 YLPM1P49750 1951 aaKnown RBP15.35■□□□□ 0.05
ZNF558-204ENST00000596172 ZNF816-ZNF321PA0A0X1KG74 233 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 A0A1B0GTI1 187 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 DHRS7CA6NNS2 312 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 H0YJX3 145 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 FAM20BO75063 409 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 DHRS3O75911 302 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 RPP14O95059 124 aaKnown RBP15.35■□□□□ 0.05
ZNF558-204ENST00000596172 CLIC3O95833 236 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 TGFAP01135 160 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 IGHV2-5P01817 119 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 MDH2P40926 338 aaKnown RBP15.35■□□□□ 0.05
ZNF558-204ENST00000596172 ACTA2P62736 377 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 ACTG2P63267 376 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 RIPPLY1Q0D2K3 151 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 GALEQ14376 348 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 ZMYND11Q15326 602 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 MPPED2Q15777 294 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 FAM166AQ6J272 317 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 FDX2Q6P4F2 183 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 FAM220AQ7Z4H9 259 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 RNF166Q96A37 237 aaPredicted RBP15.35■□□□□ 0.05
ZNF558-204ENST00000596172 ITPKCQ96DU7 683 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 GNG8Q9UK08 70 aa15.35■□□□□ 0.05
ZNF558-204ENST00000596172 FN1P02751 2386 aaKnown RBP15.34■□□□□ 0.05
ZNF558-204ENST00000596172 IGHV3-64DA0A0J9YX35 117 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 ANXA2P2A6NMY6 339 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 INAFM1C9JVW0 142 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 IRF2P14316 349 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 ZNF16P17020 682 aaPredicted RBP15.34■□□□□ 0.05
ZNF558-204ENST00000596172 CCL1P22362 96 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 PRDX4Q13162 271 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 TP53I3Q53FA7 332 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 FAM76BQ5HYJ3 339 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 PRAMEF6Q5VXH4 476 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 COMMD2Q86X83 199 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 SYS1Q8N2H4 156 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 MUC20Q8N307 709 aaPredicted RBP15.34■□□□□ 0.05
ZNF558-204ENST00000596172 SPICQ8N5J4 248 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 CCDC54Q8NEL0 328 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 OR52I1Q8NGK6 324 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 OR5P3Q8WZ94 311 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 TFAP2CQ92754 450 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 DVL3Q92997 716 aaPredicted RBP15.34■□□□□ 0.05
ZNF558-204ENST00000596172 FAM71F1Q96KD3 344 aaPredicted RBP15.34■□□□□ 0.05
ZNF558-204ENST00000596172 GAL3ST1Q99999 423 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 MICU1Q9BPX6 476 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 ZNF649Q9BS31 505 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 JAM3Q9BX67 310 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 FGF20Q9NP95 211 aaPredicted RBP15.34■□□□□ 0.05
ZNF558-204ENST00000596172 ACOXLQ9NUZ1 547 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 RNF7Q9UBF6 113 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 GTF2A1LQ9UNN4 478 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 SLC22A13Q9Y226 551 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 MYRFQ9Y2G1 1151 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 TANC2Q9HCD6 1990 aa15.34■□□□□ 0.05
ZNF558-204ENST00000596172 DYSFO75923 2080 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 IRGMA1A4Y4 181 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 ISPDA4D126 451 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 ZNF850A8MQ14 1090 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 FAM157AC9JC47 383 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 LMX1BO60663 402 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 CYB5R3P00387 301 aaPredicted RBP15.33■□□□□ 0.04
ZNF558-204ENST00000596172 CFHR2P36980 270 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 OR12D2P58182 307 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 HNRNPA0Q13151 305 aaKnown RBP15.33■□□□□ 0.04
ZNF558-204ENST00000596172 SMN1Q16637 294 aaKnown RBP15.33■□□□□ 0.04
ZNF558-204ENST00000596172 DOK3Q7L591 496 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 THAP5Q7Z6K1 395 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 KLHL36Q8N4N3 616 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 OR1M1Q8NGA1 313 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 CNIH3Q8TBE1 160 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 FBLIM1Q8WUP2 373 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 NRG4Q8WWG1 115 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 PIGCQ92535 297 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 RTL8AQ9BWD3 113 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 TLNRD1Q9H1K6 362 aa15.33■□□□□ 0.04
ZNF558-204ENST00000596172 PPP1R3EQ9H7J1 279 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms