RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 YIPF7Q8N8F6 280 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 NRG4Q8WWG1 115 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 RORBQ92753 470 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 ITPKCQ96DU7 683 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 FAM71F1Q96KD3 344 aaPredicted RBP9.35□□□□□ -0.91
VRK3-210ENST00000596121 GAL3ST1Q99999 423 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 METTL17Q9H7H0 456 aaPredicted RBP9.35□□□□□ -0.91
VRK3-210ENST00000596121 C1orf123Q9NWV4 160 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 TMEM160Q9NX00 188 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 UBAP1Q9NZ09 502 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 OR52A1Q9UKL2 312 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.35□□□□□ -0.91
VRK3-210ENST00000596121 MYRFQ9Y2G1 1151 aa9.35□□□□□ -0.91
VRK3-210ENST00000596121 MXRA5Q9NR99 2828 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 ANKRD30BLA7E2S9 258 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 B4DSR2 109 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 F5H0A9 414 aaPredicted RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 LOC110117498-PIK3R3F6TDL0 507 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 P2RY10O00398 339 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 TNFRSF13BO14836 293 aaPredicted RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 SULT1C4O75897 302 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 CST4P01036 141 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 GRPP07492 148 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 MSMBP08118 114 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 DBTP11182 482 aaKnown RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 EGR1P18146 543 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 CFL1P23528 166 aaKnown RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 ATP6V1E1P36543 226 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 MDH2P40926 338 aaKnown RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 KIR3DL2P43630 455 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 DVL1P1P54792 670 aaPredicted RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 OR12D2P58182 307 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 PRDX4Q13162 271 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 CR1LQ2VPA4 569 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 ZNF829Q3KNS6 432 aaPredicted RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 TMEM155Q4W5P6 130 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 LAIR2Q6ISS4 152 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 LYPD2Q6UXB3 125 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 KLBQ86Z14 1044 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 PACRGLQ8N7B6 248 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 DEFB108BQ8NET1 73 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 CSNK2A3Q8NEV1 391 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 OR1M1Q8NGA1 313 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 HPSE2Q8WWQ2 592 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 OR5P3Q8WZ94 311 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 PIGCQ92535 297 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 RDH12Q96NR8 316 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 TMEM246Q9BRR3 403 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 PAPOLGQ9BWT3 736 aaKnown RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 PATZ1Q9HBE1 687 aaKnown RBP9.34□□□□□ -0.91
VRK3-210ENST00000596121 ACOXLQ9NUZ1 547 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 HIF1ANQ9NWT6 349 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 KCNS2Q9ULS6 477 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 GTF2A1LQ9UNN4 478 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 WNK2Q9Y3S1 2297 aa9.34□□□□□ -0.91
VRK3-210ENST00000596121 PPIAL4EA0A075B759 164 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 A6NIN4 97 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 CEACAM18A8MTB9 384 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 KIAA1324LA8MWY0 1029 aaPredicted RBP9.33□□□□□ -0.92
VRK3-210ENST00000596121 PPIAL4DF5H284 164 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 H3BSH0 61 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 FCN3O75636 299 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 AVPP01185 164 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 LHBP01229 141 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 KRT8P05787 483 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 GNAO1P09471 354 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 WNT2P09544 360 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 PPIAL4FP0DN26 164 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 FAHP16930 419 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 CD80P33681 288 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 NANOS3P60323 173 aaKnown RBP9.33□□□□□ -0.92
VRK3-210ENST00000596121 ZNF154Q13106 437 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 ODF4Q2M2E3 257 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 ZNF404Q494X3 552 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 CDONQ4KMG0 1287 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 WDR38Q5JTN6 314 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 BCL2L15Q5TBC7 163 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 ZNF691Q5VV52 312 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
VRK3-210ENST00000596121 Q6ZSR3 168 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 PEG10Q86TG7 708 aaKnown RBP9.33□□□□□ -0.92
VRK3-210ENST00000596121 RDH10Q8IZV5 341 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 GCSAMQ8N6F7 178 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 BOLLQ8N9W6 283 aaKnown RBP9.33□□□□□ -0.92
VRK3-210ENST00000596121 SPERTQ8NA61 448 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 OR52I1Q8NGK6 324 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 OR14K1Q8NGZ2 314 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 CNIH3Q8TBE1 160 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 ERGIC1Q969X5 290 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 TMEM186Q96B77 213 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 SEH1LQ96EE3 360 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 ISG20L2Q9H9L3 353 aaKnown RBP9.33□□□□□ -0.92
VRK3-210ENST00000596121 FN3KRPQ9HA64 309 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 MRPS18AQ9NVS2 196 aaKnown RBP9.33□□□□□ -0.92
VRK3-210ENST00000596121 RNF7Q9UBF6 113 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 ZNF391Q9UJN7 358 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 PPIAL4AQ9Y536 164 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 SNX5Q9Y5X3 404 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms