RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 M0R1W7 72 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 TIPRLO75663 272 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 GADD45GO95257 159 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 SEMG1P04279 462 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 COX4I1P13073 169 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 IKZF1Q13422 519 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 DGUOKQ16854 277 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 KLHL12Q53G59 568 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 LRRC10Q5BKY1 277 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 NCR3LG1Q68D85 454 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 C11orf88Q6PI97 169 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 HACD2Q6Y1H2 254 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 ZNF788Q6ZQV5 615 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 KLHDC1Q8N7A1 406 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 PROKR2Q8NFJ6 384 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 OR5T2Q8NGG2 359 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 OR4C15Q8NGM1 316 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 OR2T4Q8NH00 348 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 SLAMF6Q96DU3 332 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 KCTD14Q9BQ13 255 aaPredicted RBP8.13□□□□□ -1.11
LIG1-209ENST00000596104 TOR3AQ9H497 397 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 CENPMQ9NSP4 180 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 CD300AQ9UGN4 299 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 SAMD4AQ9UPU9 718 aaKnown RBP8.13□□□□□ -1.11
LIG1-209ENST00000596104 MAB21L2Q9Y586 359 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 N6AMT1Q9Y5N5 214 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
LIG1-209ENST00000596104 ZNF878C9JN71 531 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 NDUFAB1O14561 156 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 CDIPTO14735 213 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 SPARCP09486 303 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 NAA10P41227 235 aaPredicted RBP8.12□□□□□ -1.11
LIG1-209ENST00000596104 ENTPD1P49961 510 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 SMIM11AP58511 58 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 MXRA7P84157 204 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 SPIBQ01892 262 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 TSPAN31Q12999 210 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 KRT72Q14CN4 511 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 OXLD1Q5BKU9 147 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 TEX30Q5JUR7 227 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 GLYATQ6IB77 296 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 PGBD2Q6P3X8 592 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 PRSS45Q7RTY3 260 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 OR51L1Q8NGJ5 315 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 OR4C13Q8NGP0 309 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 OR9Q1Q8NGQ5 310 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 MRAPQ8TCY5 172 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 H1FXQ92522 213 aaKnown RBP8.12□□□□□ -1.11
LIG1-209ENST00000596104 PPP1R14AQ96A00 147 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 SGK3Q96BR1 496 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 ITPKCQ96DU7 683 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 GAFA1Q96PS6 74 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 RAB3IPQ96QF0 476 aaPredicted RBP8.12□□□□□ -1.11
LIG1-209ENST00000596104 SSX3Q99909 188 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 DNTTIP1Q9H147 329 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 MEGF9Q9H1U4 602 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 WDR13Q9H1Z4 485 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 RANBP3Q9H6Z4 567 aaPredicted RBP8.12□□□□□ -1.11
LIG1-209ENST00000596104 EGLN3Q9H6Z9 239 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 METTL8Q9H825 291 aaKnown RBP8.12□□□□□ -1.11
LIG1-209ENST00000596104 SNTG1Q9NSN8 517 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 HAO2Q9NYQ3 351 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 ZNF319Q9P2F9 582 aa8.12□□□□□ -1.11
LIG1-209ENST00000596104 DHRS12A0PJE2 317 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 SIGLEC5O15389 551 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 TBX1O43435 398 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 TFF1P04155 84 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 CX3CR1P49238 355 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 GSK3AP49840 483 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 NUDT2P50583 147 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 CAV3P56539 151 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 LOXL3P58215 753 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 PSME3P61289 254 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 TAF13Q15543 124 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 LY6EQ16553 131 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 AANATQ16613 207 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 TIGD6Q17RP2 521 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 ZNF511Q8NB15 262 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 SLC37A3Q8NCC5 494 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 OR51G2Q8NGK0 314 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 OR8D4Q8NGM9 314 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 OR10Z1Q8NGY1 313 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 OR2T6Q8NHC8 308 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 ANGPTL6Q8NI99 470 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 GNPDA2Q8TDQ7 276 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 RORBQ92753 470 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 DUS3LQ96G46 650 aaKnown RBP8.11□□□□□ -1.11
LIG1-209ENST00000596104 REEP6Q96HR9 211 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 PYURFQ96I23 114 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 PAPOLGQ9BWT3 736 aaKnown RBP8.11□□□□□ -1.11
LIG1-209ENST00000596104 NMNAT2Q9BZQ4 307 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 FGF23Q9GZV9 251 aaPredicted RBP8.11□□□□□ -1.11
LIG1-209ENST00000596104 GORASP2Q9H8Y8 452 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 VIPAS39Q9H9C1 493 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 EFCAB1Q9HAE3 211 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 NECAP2Q9NVZ3 263 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 AURKAIP1Q9NWT8 199 aaPredicted RBP8.11□□□□□ -1.11
LIG1-209ENST00000596104 SLC25A10Q9UBX3 287 aaPredicted RBP8.11□□□□□ -1.11
LIG1-209ENST00000596104 ZNF391Q9UJN7 358 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 SF3B6Q9Y3B4 125 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms