RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 LRRC28Q86X40 367 aaPredicted RBP11.03□□□□□ -0.64
SCAF1-202ENST00000595242 ST7LQ8TDW4 575 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 THEM6Q8WUY1 208 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 NSMAFQ92636 917 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 FBXO17Q96EF6 278 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 CMTM3Q96MX0 182 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 VRK1Q99986 396 aaPredicted RBP11.03□□□□□ -0.64
SCAF1-202ENST00000595242 ABHD6Q9BV23 337 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 COMMD4Q9H0A8 199 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 ABRACLQ9P1F3 81 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 COMMD3Q9UBI1 195 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
SCAF1-202ENST00000595242 hCG_2014768A0A024R1R8 64 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 IGKV1D-43A0A0B4J1Z2 117 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 A0A1W2PR80 420 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 FUOMA2VDF0 154 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 PSMD9O00233 223 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 GPR171O14626 319 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 HPGDSO60760 199 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 LILRA1O75019 489 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 RAD51DO75771 328 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 HLA-DQA2P01906 255 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 SPARCP09486 303 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 DCTDP32321 178 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 BCAP31P51572 246 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 RIDAP52758 137 aaKnown RBP11.02□□□□□ -0.65
SCAF1-202ENST00000595242 OR10A3P58181 314 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 CSNK2A1P68400 391 aaPredicted RBP11.02□□□□□ -0.65
SCAF1-202ENST00000595242 EIF2B1Q14232 305 aaKnown RBP11.02□□□□□ -0.65
SCAF1-202ENST00000595242 WDR38Q5JTN6 314 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 GLB1L2Q8IW92 636 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 PRSS35Q8N3Z0 413 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.65
SCAF1-202ENST00000595242 RBP7Q96R05 134 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 MRI1Q9BV20 369 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 C1QTNF6Q9BXI9 259 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 ELOVL3Q9HB03 270 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 NOX4Q9NPH5 578 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 CYSLTR2Q9NS75 346 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 TBC1D24Q9ULP9 559 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
SCAF1-202ENST00000595242 RPP14O95059 124 aaKnown RBP11.01□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF823P16415 610 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF43P17038 809 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 SRMP19623 302 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 NPR2P20594 1047 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 ENPP1P22413 925 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 GIFP27352 417 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 LAP3P28838 519 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 RPS27P42677 84 aaKnown RBP11.01□□□□□ -0.65
SCAF1-202ENST00000595242 ASAH1Q13510 395 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 BAK1Q16611 211 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 IDNKQ5T6J7 187 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 TMEM225Q6GV28 225 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 LRRN1Q6UXK5 716 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 FOXL2NBQ6ZUU3 175 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 RHOUQ7L0Q8 258 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 KRT77Q7Z794 578 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 CATSPERDQ86XM0 798 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 POC5Q8NA72 575 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 IL17RDQ8NFM7 739 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 GPR148Q8TDV2 347 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 RNF133Q8WVZ7 376 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 MRPL24Q96A35 216 aaKnown RBP11.01□□□□□ -0.65
SCAF1-202ENST00000595242 JMJD8Q96S16 334 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 GFI1Q99684 422 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 KCNJ15Q99712 375 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 NAA11Q9BSU3 229 aaPredicted RBP11.01□□□□□ -0.65
SCAF1-202ENST00000595242 SF3B5Q9BWJ5 86 aaKnown RBP11.01□□□□□ -0.65
SCAF1-202ENST00000595242 BCO1Q9HAY6 547 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 ING1Q9UK53 422 aaPredicted RBP11.01□□□□□ -0.65
SCAF1-202ENST00000595242 LRP12Q9Y561 859 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 WNK1Q9H4A3 2382 aa11.01□□□□□ -0.65
SCAF1-202ENST00000595242 IGHV3-15A0A0B4J1V0 119 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 ACOD1A6NK06 481 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 WNT11O96014 354 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 ATF1P18846 271 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 ELK1P19419 428 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 PSMD7P51665 324 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 SCAND1P57086 179 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 CLRN1P58418 232 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 SNRPD2P62316 118 aaKnown RBP11□□□□□ -0.65
SCAF1-202ENST00000595242 C10orf128Q5T292 105 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 TRMT10AQ8TBZ6 339 aaKnown RBP11□□□□□ -0.65
SCAF1-202ENST00000595242 C11orf40Q8WZ69 217 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 TMEM54Q969K7 222 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 MCHR2Q969V1 340 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 ZNF775Q96BV0 537 aaPredicted RBP11□□□□□ -0.65
SCAF1-202ENST00000595242 EMC6Q9BV81 110 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 RABL2AQ9UBK7 228 aaPredicted RBP11□□□□□ -0.65
SCAF1-202ENST00000595242 CYB5R1Q9UHQ9 305 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 SPATA2Q9UM82 520 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 RABL2BQ9UNT1 228 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 R4GMQ9 66 aa11□□□□□ -0.65
SCAF1-202ENST00000595242 A0A1W2PQ09 198 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 CIB4A0PJX0 185 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 AIPO00170 330 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 PFDN1O60925 122 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 MPZL1O95297 269 aa10.99□□□□□ -0.65
SCAF1-202ENST00000595242 PNPP00491 289 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms