RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 SLC25A16P16260 332 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 CCL1P22362 96 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 COL8A2P25067 703 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 GIFP27352 417 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 CCR9P51686 369 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 NANOS3P60323 173 aaKnown RBP12.65□□□□□ -0.38
DDX39A-221ENST00000593026 RIPPLY1Q0D2K3 151 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 HFEQ30201 348 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 SPERTQ8NA61 448 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 OR8S1Q8NH09 359 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 OR52N1Q8NH53 320 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 MYDGFQ969H8 173 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 ZNF275Q9NSD4 429 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-221ENST00000593026 CLEC2DQ9UHP7 191 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 PPP1R3CQ9UQK1 317 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 PIGLQ9Y2B2 252 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 MPC1Q9Y5U8 109 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 CACNG2Q9Y698 323 aa12.65□□□□□ -0.38
DDX39A-221ENST00000593026 IGHV3-64DA0A0J9YX35 117 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 LOC107986453A0A1B0GWG9 222 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 ANXA2P2A6NMY6 339 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 E9PI62 339 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 SYT7O43581 403 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 CST4P01036 141 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 CDK1P06493 297 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 FAHP16930 419 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 C21orf33P30042 268 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-221ENST00000593026 CD200P41217 278 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 MZT1Q08AG7 82 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 PRDX4Q13162 271 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 RIN1Q13671 783 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 ALKBH1Q13686 389 aaKnown RBP12.64□□□□□ -0.39
DDX39A-221ENST00000593026 ZBTB37Q5TC79 503 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 CELF2-AS1Q8N7Q2 184 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF676Q8N7Q3 588 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 PIGCQ92535 297 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 CCL17Q92583 94 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 BPESC1Q9GZL8 116 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 PLEKHA1Q9HB21 404 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 ABCB9Q9NP78 766 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 C14orf119Q9NWQ9 140 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 PAK1IP1Q9NWT1 392 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-221ENST00000593026 TREM2Q9NZC2 230 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 ENPP5Q9UJA9 477 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 PCDHGB5Q9Y5G0 923 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 V9GYS6 101 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-221ENST00000593026 ITPR3Q14573 2671 aa12.64□□□□□ -0.39
DDX39A-221ENST00000593026 DHRS7CA6NNS2 312 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF850A8MQ14 1090 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 VWC2LB2RUY7 222 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 CLDN25C9JDP6 229 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 RNF223E7ERA6 249 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 H3BSH0 61 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 H7C1Q1 480 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 MYL12BO14950 172 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 DENRO43583 198 aaKnown RBP12.63□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF12P17014 697 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 CRHBPP24387 322 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 NR4A2P43354 598 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 GPR6P46095 362 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-221ENST00000593026 TGM4P49221 684 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 TMEM33P57088 247 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 SLC35A2P78381 396 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 SLC3A1Q07837 685 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 MAB21L1Q13394 359 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 RBM48Q5RL73 367 aaKnown RBP12.63□□□□□ -0.39
DDX39A-221ENST00000593026 TMEM244Q5VVB8 128 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 Q6ZSR3 168 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 RDH10Q8IZV5 341 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 CCDC54Q8NEL0 328 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 OR14K1Q8NGZ2 314 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 REG4Q9BYZ8 158 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 COMMD4Q9H0A8 199 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 PPP1R3EQ9H7J1 279 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 GCM1Q9NP62 436 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 BABAM2Q9NXR7 383 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 ERGIC3Q9Y282 383 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 TANC2Q9HCD6 1990 aa12.63□□□□□ -0.39
DDX39A-221ENST00000593026 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 TMEM212A6NML5 194 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 OR4C45A6NMZ5 311 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 IFNL4K9M1U5 179 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 PPIHO43447 177 aaKnown RBP12.62□□□□□ -0.39
DDX39A-221ENST00000593026 ISG15P05161 165 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 CD99P14209 185 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 GATA4P43694 442 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 GTF2A1P52655 376 aaPredicted RBP12.62□□□□□ -0.39
DDX39A-221ENST00000593026 CCDC58Q4VC31 144 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 PRAMEF6Q5VXH4 476 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 KRT74Q7RTS7 529 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 MOGAT3Q86VF5 341 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 ZDHHC23Q8IYP9 409 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 SGCDQ92629 289 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 ITPKCQ96DU7 683 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 HIST1H2AAQ96QV6 131 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 MICU1Q9BPX6 476 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 RTL8AQ9BWD3 113 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms