RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, human

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VMP1-216	ENST00000592790	C19orf12	Q9NSK7	152 aa		3.17	□□□□□ -1.9
VMP1-216	ENST00000592790	METRN	Q9UJH8	293 aa		3.17	□□□□□ -1.9
VMP1-216	ENST00000592790	PUS1	Q9Y606	427 aa	Known RBP eCLIP	3.17	□□□□□ -1.9
VMP1-216	ENST00000592790	TRAV8-7	A0A075B6U6	113 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790		A0A1B0GTI1	187 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	DUXB	A0A1W2PPF3	345 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	GPR31	O00270	319 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	DCTN6	O00399	190 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PIN1P1	O15428	100 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	LRP3	O75074	770 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	LY86	O95711	162 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	IGHM	P01871	453 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	SERPINE2	P07093	398 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PGA3	P0DJD8	388 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CTGF	P29279	349 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	AVPR2	P30518	371 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CAPZB	P47756	277 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MTCP1	P56278	107 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	DUSP2	Q05923	314 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	SKP2	Q13309	424 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MFAP5	Q13361	173 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ZNF124	Q15973	351 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MOGAT2	Q3SYC2	334 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	LBH	Q53QV2	105 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MEST	Q5EB52	335 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	EXOSC6	Q5RKV6	272 aa	Known RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	LCN10	Q6JVE6	187 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ADAM5	Q6NVV9	412 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ZNF813	Q6ZN06	617 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	FAM57B	Q71RH2	274 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MCEMP1	Q8IX19	187 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	OR8G5	Q8NG78	346 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	OR51A4	Q8NGJ6	313 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	SLC37A2	Q8TED4	501 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	AQP3	Q92482	292 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	TAAR8	Q969N4	342 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CPNE4	Q96A23	557 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	EAF1	Q96JC9	268 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	OR5B2	Q96R09	309 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	REG4	Q9BYZ8	158 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	TUBA4B	Q9H853	241 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	FN3KRP	Q9HA64	309 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	STARD5	Q9NSY2	213 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CACFD1	Q9UGQ2	172 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	HDGFL3	Q9Y3E1	203 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CXorf65	A6NEN9	183 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	DBX1	A6NMT0	343 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	DNASE2	O00115	360 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CNOT4	O95628	575 aa	Known RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MT-CO2	P00403	227 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	HLA-H	P01893	362 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MB	P02144	154 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	BGLAP	P02818	100 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CRYBA1	P05813	215 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	KLK3	P07288	261 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	FOLR2	P14207	255 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	GNB3	P16520	340 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MSR1	P21757	451 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	GABRR1	P24046	479 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	NKX2-1	P43699	371 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	SUCLG1	P53597	346 aa	Known RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	RPS11	P62280	158 aa	Known RBP eCLIP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ZNF117	Q03924	483 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PLP2	Q04941	152 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	BAX	Q07812	192 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	OR8B8	Q15620	311 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	MSMO1	Q15800	293 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PCK2	Q16822	640 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	NSUN5P2	Q63ZY6	315 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	TANGO2	Q6ICL3	276 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	CFAP161	Q6P656	301 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	DPPA2	Q7Z7J5	298 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	COMTD1	Q86VU5	262 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	NR2C2AP	Q86WQ0	139 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	HOGA1	Q86XE5	327 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	TMEFF1	Q8IYR6	380 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PUSL1	Q8N0Z8	303 aa	Known RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	METTL27	Q8N6F8	245 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	C12orf76	Q8N812	135 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ZNF610	Q8N9Z0	462 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	OR2G3	Q8NGZ4	309 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	GPBAR1	Q8TDU6	330 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	C2CD4C	Q8TF44	421 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	TSLP	Q969D9	159 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	KTI12	Q96EK9	354 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	LURAP1	Q96LR2	239 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ZNF75A	Q96N20	296 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	OXGR1	Q96P68	337 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	SMIM3	Q9BZL3	60 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	NKX2-4	Q9H2Z4	354 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	OR51M1	Q9H341	326 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	TCEAL2	Q9H3H9	227 aa	Predicted RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PLEKHF2	Q9H8W4	249 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	ZMAT3	Q9HA38	289 aa	Known RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PARPBP	Q9NWS1	579 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	FBLN5	Q9UBX5	448 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	PILRA	Q9UKJ1	303 aa		3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	NXT1	Q9UKK6	140 aa	Known RBP	3.16	□□□□□ -1.9
VMP1-216	ENST00000592790	FBXO4	Q9UKT5	387 aa		3.16	□□□□□ -1.9

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