RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 RPS2P15880 293 aaKnown RBP13.15□□□□□ -0.3
LIG3-215ENST00000592690 CD80P33681 288 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 GNALP38405 381 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 CSNK2BP67870 215 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 EGR3Q06889 387 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 PRDX4Q13162 271 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 TMED1Q13445 227 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
LIG3-215ENST00000592690 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 BOLLQ8N9W6 283 aaKnown RBP13.15□□□□□ -0.3
LIG3-215ENST00000592690 PLPP7Q8NBV4 271 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 OR1M1Q8NGA1 313 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 OR10H4Q8NGA5 316 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 OR51E1Q8TCB6 317 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 TRUB1Q8WWH5 349 aaKnown RBP13.15□□□□□ -0.3
LIG3-215ENST00000592690 STMN2Q93045 179 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 RFKQ969G6 155 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 ITPKCQ96DU7 683 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 FAM71F1Q96KD3 344 aaPredicted RBP13.15□□□□□ -0.3
LIG3-215ENST00000592690 TMPRSS13Q9BYE2 586 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 FGF23Q9GZV9 251 aaPredicted RBP13.15□□□□□ -0.3
LIG3-215ENST00000592690 GPR84Q9NQS5 396 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 ZNF391Q9UJN7 358 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 GTF2A1LQ9UNN4 478 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 GMPPBQ9Y5P6 360 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 R4GMQ9 66 aa13.15□□□□□ -0.3
LIG3-215ENST00000592690 A0A0G2JMP0 313 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 A0A0X1KG70 313 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 hCG_1807616A0A1W2PRN6 198 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 A8MXK9 166 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 ANKRD65E5RJM6 399 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
LIG3-215ENST00000592690 FOXH1O75593 365 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 FSTL3O95633 263 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 CST4P01036 141 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 IFNA2P01563 188 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 WNT2P09544 360 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 OR2T7P0C7T2 308 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 EGR1P18146 543 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 ATP6V1E1P36543 226 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 SRP14P37108 136 aaKnown RBP13.14□□□□□ -0.31
LIG3-215ENST00000592690 SNRPGP62308 76 aaKnown RBP13.14□□□□□ -0.31
LIG3-215ENST00000592690 MZT1Q08AG7 82 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 ZNF154Q13106 437 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 SFRP4Q6FHJ7 346 aaPredicted RBP13.14□□□□□ -0.31
LIG3-215ENST00000592690 LYPD2Q6UXB3 125 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 FTMTQ8N4E7 242 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 GCSAMQ8N6F7 178 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 DEFB108BQ8NET1 73 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 OR4M2Q8NGB6 313 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 OR2T27Q8NH04 317 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 HPSE2Q8WWQ2 592 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 PIGCQ92535 297 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 METTL17Q9H7H0 456 aaPredicted RBP13.14□□□□□ -0.31
LIG3-215ENST00000592690 MMP26Q9NRE1 261 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 MPC1Q9Y5U8 109 aa13.14□□□□□ -0.31
LIG3-215ENST00000592690 FBN1P35555 2871 aaKnown RBP13.14□□□□□ -0.31
LIG3-215ENST00000592690 LOC105371242A0A075B767 164 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 ANXA2P2A6NMY6 339 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 C3orf80F5H4A9 247 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 TRAPPC2LH3BP13 241 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 RPP14O95059 124 aaKnown RBP13.13□□□□□ -0.31
LIG3-215ENST00000592690 KRT8P05787 483 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 GABRB1P18505 474 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 THBS2P35442 1172 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 MAP2K3P46734 347 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 MTNR1AP48039 350 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 ZNF85Q03923 595 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 SNCBQ16143 134 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 OCLNQ16625 522 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 ESCO2Q56NI9 601 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 SLC25A30Q5SVS4 291 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 ZNF684Q5T5D7 378 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 BCL2L15Q5TBC7 163 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 ENTHD1Q8IYW4 607 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 YIPF7Q8N8F6 280 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 RNFT2Q96EX2 444 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 MDFIQ99750 246 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 MOB1AQ9H8S9 216 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 MIOXQ9UGB7 285 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 OR52A1Q9UKL2 312 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
LIG3-215ENST00000592690 LRCH1Q9Y2L9 728 aa13.13□□□□□ -0.31
LIG3-215ENST00000592690 ZNF816-ZNF321PA0A0X1KG74 233 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 LGALS8O00214 317 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 FAHP16930 419 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 ADRA2CP18825 462 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 IL5RAQ01344 420 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 DMRTC1Q5HYR2 192 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 LIPNQ5VXI9 398 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 MEDAGQ5VYS4 303 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 WDR82Q6UXN9 313 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 DCDC5Q6ZRR9 648 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 ZDHHC23Q8IYP9 409 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 ELMOD2Q8IZ81 293 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 GALNT4Q8N4A0 578 aa13.12□□□□□ -0.31
LIG3-215ENST00000592690 LRRC29Q8WV35 223 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms