RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 C12orf77C9JDV5 145 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 F8VP50 259 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 F8VZ95 297 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 NUPL2O15504 423 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 HCRTR1O43613 425 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 GATCO43716 136 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 CDC40O60508 579 aaKnown RBP eCLIP2.3□□□□□ -2.04
TPM4-214ENST00000591645 ICOSLGO75144 302 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 NDUFS6O75380 124 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 LYPLA1O75608 230 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 HPRT1P00492 218 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 CATP04040 527 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 PGAM1P18669 254 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 F2RP25116 425 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 PSMB6P28072 239 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 P2RY2P41231 377 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 RBM34P42696 430 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 VDAC2P45880 294 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 CSNK1DP48730 415 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 RAB7AP51149 207 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 PLTPP55058 493 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 DLX1P56177 255 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 STX17P56962 302 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 VSX2P58304 361 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 TAS2R39P59534 338 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 TSPAN5P62079 268 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 SLC25A11Q02978 314 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 TGFBR3Q03167 851 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 ST3GAL4Q11206 333 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 TCP10Q12799 353 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 ZNF658Q5TYW1 1059 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 ZNF691Q5VV52 312 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 AP1ARQ63HQ0 302 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 THOC7Q6I9Y2 204 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 WDR82Q6UXN9 313 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 UNQ9370/PRO34162Q6UXP9 181 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 TMEM179Q6ZVK1 233 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 MRPL55Q7Z7F7 128 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 ZNF589Q86UQ0 364 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 HORMAD1Q86X24 394 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 LRRC6Q86X45 466 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 NELFCDQ8IXH7 590 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 CBR4Q8N4T8 237 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 MREGQ8N565 214 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 TMEM252Q8N6L7 170 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 NECAP1Q8NC96 275 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 VN1R2Q8NFZ6 395 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 OR4F15Q8NGB8 312 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 OR1N2Q8NGR9 330 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 OR10R2Q8NGX6 335 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 APH1BQ8WW43 257 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 CHCHD10Q8WYQ3 142 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 OR8D1Q8WZ84 308 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 ITFG2Q969R8 447 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 RPEQ96AT9 228 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 SLC25A38Q96DW6 304 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 DUS3LQ96G46 650 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 ZNF514Q96K75 400 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 FAM210AQ96ND0 272 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 SERPINB11Q96P15 392 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 P2RX4Q99571 388 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 KIR2DL4Q99706 377 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 EBF4Q9BQW3 602 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 ZNF251Q9BRH9 671 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 C7orf50Q9BRJ6 194 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 CNPY3Q9BT09 278 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 UPF3BQ9BZI7 483 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 C20orf85Q9H1P6 137 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 SAV1Q9H4B6 383 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 NECAP2Q9NVZ3 263 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 SDHAF2Q9NX18 166 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 QPCTLQ9NXS2 382 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 SLC17A7Q9P2U7 560 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 CLEC2DQ9UHP7 191 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 NXT1Q9UKK6 140 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 CBY1Q9Y3M2 126 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 FADS3Q9Y5Q0 445 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 URGCP-MRPS24S4R325 110 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 MROH7Q68CQ1 1323 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 USP42Q9H9J4 1324 aaKnown RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 PCLOQ9Y6V0 5065 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 SCN11AQ9UI33 1791 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 PLXNA3P51805 1871 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 EP300Q09472 2414 aaPredicted RBP2.3□□□□□ -2.04
TPM4-214ENST00000591645 UBR4Q5T4S7 5183 aa2.3□□□□□ -2.04
TPM4-214ENST00000591645 NOTCH1P46531 2555 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 TRPM3Q9HCF6 1732 aaPredicted RBP2.29□□□□□ -2.04
TPM4-214ENST00000591645 NHSQ6T4R5 1651 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 LMO7Q8WWI1 1683 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 GAKO14976 1311 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 A0A0A6YYH2 397 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 TRAV39A0A0B4J263 110 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 A0A1B0GVI7 797 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 A6NDN8 102 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 A6NJ64 397 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 GOLGA8JA6NMD2 632 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 ERVV-1B6SEH8 477 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 PANO1I0J062 215 aa2.29□□□□□ -2.04
TPM4-214ENST00000591645 K7N7A8 449 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms