RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PCDHGB5Q9Y5G0 923 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 INSIG2Q9Y5U4 225 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 MGAM2Q2M2H8 2515 aa7.94□□□□□ -1.14
BRCA1-226ENST00000591534 IGKV1D-43A0A0B4J1Z2 117 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 DNAJC9-AS1A6NH13 148 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 A8MXK9 166 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 DLGAP1O14490 977 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 TXNDC12O95881 172 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 NGFP01138 241 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 CPEP16870 476 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 KITLGP21583 273 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 ZFP36P26651 326 aaKnown RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 DCKP27707 260 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 SRP9P49458 86 aaKnown RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 RGS6P49758 472 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 BPIFB3P59826 476 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 CTXN1P60606 82 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 FMODQ06828 376 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 PPP1R8Q12972 351 aaKnown RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 PSG7Q13046 419 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 MRPL28Q13084 256 aaKnown RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF362Q5T0B9 420 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF774Q6NX45 483 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 IGFN1Q86VF2 1251 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 C1orf87Q8N0U7 546 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 Q8N1Y9 231 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 TSPAN14Q8NG11 270 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 OR2T4Q8NH00 348 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 PTP4A1Q93096 173 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 NMD3Q96D46 503 aaKnown RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 IL4I1Q96RQ9 567 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 UNKLQ9H9P5 680 aaKnown RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 NRIP3Q9NQ35 241 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 TVP23BQ9NYZ1 205 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF69Q9UC07 566 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 MIOXQ9UGB7 285 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-226ENST00000591534 TMEM14AQ9Y6G1 99 aa7.93□□□□□ -1.14
BRCA1-226ENST00000591534 TRAV27A0A087WT01 109 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF561-AS1K7EIQ3 104 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 PHYHO14832 338 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 SGCEO43556 437 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 RGS10O43665 173 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 DOK2O60496 412 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 NOL3O60936 208 aaKnown RBP7.92□□□□□ -1.14
BRCA1-226ENST00000591534 CRYBA1P05813 215 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 LYNP07948 512 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 RAC2P15153 192 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 RPS2P15880 293 aaKnown RBP7.92□□□□□ -1.14
BRCA1-226ENST00000591534 HTR5AP47898 357 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 SLC25A1P53007 311 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 GNB2P62879 340 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.92□□□□□ -1.14
BRCA1-226ENST00000591534 RNLSQ5VYX0 342 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 FOXL2NBQ6ZUU3 175 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 C9orf139Q6ZV77 190 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 PRSS48Q7RTY5 328 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 STX19Q8N4C7 294 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 LRRC75AQ8NAA5 344 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 OR9Q1Q8NGQ5 310 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 OR13G1Q8NGZ3 307 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 OR51A7Q8NH64 312 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 RASD2Q96D21 266 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 HAVCR1Q96D42 359 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 CMBLQ96DG6 245 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF582Q96NG8 517 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-226ENST00000591534 ERMAPQ96PL5 475 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-226ENST00000591534 OR2V2Q96R30 315 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 SSBP3Q9BWW4 388 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-226ENST00000591534 POLE4Q9NR33 117 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 MMP26Q9NRE1 261 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 HAO2Q9NYQ3 351 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 ERGIC3Q9Y282 383 aa7.92□□□□□ -1.14
BRCA1-226ENST00000591534 E9PQ18 207 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 F5H0A9 414 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-226ENST00000591534 TRAPPC2LH3BP13 241 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 TMEM178BH3BS89 294 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 SLC1A7O00341 560 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 BHLHE40O14503 412 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 CDC42EP2O14613 210 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 KCNAB3O43448 404 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 MITFO75030 526 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-226ENST00000591534 FAM20BO75063 409 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 SOX14O95416 240 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 FSTL3O95633 263 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 IRF2P14316 349 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 SELEP16581 610 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 CRHBPP24387 322 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 HTR1FP30939 366 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 RANBP1P43487 201 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 RPL5P46777 297 aaKnown RBP7.91□□□□□ -1.14
BRCA1-226ENST00000591534 PAX8Q06710 450 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 DBPQ10586 325 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-226ENST00000591534 AQP6Q13520 282 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 ZMYND11Q15326 602 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 SLC9A3R2Q15599 337 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 PDLIM3Q53GG5 364 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-226ENST00000591534 CLEC12AQ5QGZ9 265 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 C16orf87Q6PH81 154 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF773Q6PK81 442 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms