RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
NPC1-207ENST00000588867 PP6455Q8WZ26 134 aa12.45□□□□□ -0.42
NPC1-207ENST00000588867 HAVCR1Q96D42 359 aa12.45□□□□□ -0.42
NPC1-207ENST00000588867 SLC30A2Q9BRI3 323 aa12.45□□□□□ -0.42
NPC1-207ENST00000588867 PPP1R3EQ9H7J1 279 aa12.45□□□□□ -0.42
NPC1-207ENST00000588867 GPR173Q9NS66 373 aa12.45□□□□□ -0.42
NPC1-207ENST00000588867 DUSP13Q9UII6 198 aa12.45□□□□□ -0.42
NPC1-207ENST00000588867 ZNF850A8MQ14 1090 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 GMDSO60547 372 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 NRASP01111 189 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 ADRA2CP18825 462 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 SOX6P35712 828 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 PEX19P40855 299 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 RORCP51449 518 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 RPS23P62266 143 aaKnown RBP12.44□□□□□ -0.42
NPC1-207ENST00000588867 SRSF1Q07955 248 aaKnown RBP eCLIP12.44□□□□□ -0.42
NPC1-207ENST00000588867 UBE2V2Q15819 145 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 DGUOKQ16854 277 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 ALKBH6Q3KRA9 238 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 CLVS2Q5SYC1 327 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 NR2C2APQ86WQ0 139 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 FTMTQ8N4E7 242 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 SLC25A46Q96AG3 418 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 PIK3IP1Q96FE7 263 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 PAPOLGQ9BWT3 736 aaKnown RBP12.44□□□□□ -0.42
NPC1-207ENST00000588867 CHST5Q9GZS9 411 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 KCNN3Q9UGI6 736 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 ADGRG4Q8IZF6 3080 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 ANKRD30BLA7E2S9 258 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 SULT1B1O43704 296 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 LILRA1O75019 489 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 PLA2G2AP14555 144 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 SELEP16581 610 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 BDKRB2P30411 391 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 MOB3CQ70IA8 216 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 NUP37Q8NFH4 326 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 SYNPRQ8TBG9 265 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 TMEM138Q9NPI0 162 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 V9GY05 133 aa12.44□□□□□ -0.42
NPC1-207ENST00000588867 MYO18BQ8IUG5 2567 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 MAGEB3O15480 346 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 TIMM8AO60220 97 aaPredicted RBP12.43□□□□□ -0.42
NPC1-207ENST00000588867 HCKP08631 526 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 ZBTB37Q5TC79 503 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 MBNL2Q5VZF2 373 aaKnown RBP12.43□□□□□ -0.42
NPC1-207ENST00000588867 UTS2BQ765I0 119 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 LRP11Q86VZ4 500 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 TRMT10AQ8TBZ6 339 aaKnown RBP12.43□□□□□ -0.42
NPC1-207ENST00000588867 SSC4DQ8WTU2 575 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 TMEM171Q8WVE6 324 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 GFI1Q99684 422 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 NKX3-1Q99801 234 aaPredicted RBP12.43□□□□□ -0.42
NPC1-207ENST00000588867 BARHL1Q9BZE3 327 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 CA10Q9NS85 328 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 GPR160Q9UJ42 338 aa12.43□□□□□ -0.42
NPC1-207ENST00000588867 PURGQ9UJV8 347 aaKnown RBP12.43□□□□□ -0.42
NPC1-207ENST00000588867 IGKV1-9A0A0C4DH69 117 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 MEGF11A6BM72 1044 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 SIAH2O43255 324 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 ATF1P18846 271 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 CA6P23280 308 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 PSMD7P51665 324 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 PRDX4Q13162 271 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 MSMPQ1L6U9 139 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 TMEM255AQ5JRV8 349 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 IDNKQ5T6J7 187 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 DDI2Q5TDH0 399 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 PLCXD3Q63HM9 321 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 ZNF529Q6P280 563 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 DMRTC2Q8IXT2 367 aaPredicted RBP12.42□□□□□ -0.42
NPC1-207ENST00000588867 JAGN1Q8N5M9 183 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 OR52N4Q8NGI2 321 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 PIGTQ969N2 578 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 ITFG2Q969R8 447 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 SPACA5Q96QH8 159 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 SYT3Q9BQG1 590 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 DAPK2Q9UIK4 370 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 CMAHPQ9Y471 501 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 NOTOA8MTQ0 251 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 DEFB108AA8MXU0 73 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 IQCF6A8MYZ5 107 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 SHISA9B4DS77 424 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 J3QKU1 62 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 PLAUP00749 431 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 CST4P01036 141 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 ERCC1P07992 297 aaPredicted RBP12.42□□□□□ -0.42
NPC1-207ENST00000588867 SLC2A2P11168 524 aaPredicted RBP12.42□□□□□ -0.42
NPC1-207ENST00000588867 ZNF250P15622 560 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 KLF3P57682 345 aaPredicted RBP12.42□□□□□ -0.42
NPC1-207ENST00000588867 SELENOVP59797 346 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 HES5Q5TA89 166 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 GLT8D1Q68CQ7 371 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 TMEM42Q69YG0 159 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 SFXN4Q6P4A7 337 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 NEUROG1Q92886 237 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 DVL3Q92997 716 aaPredicted RBP12.42□□□□□ -0.42
NPC1-207ENST00000588867 HS3ST6Q96QI5 342 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 PLGRKTQ9HBL7 147 aa12.42□□□□□ -0.42
NPC1-207ENST00000588867 PTTG2Q9NZH5 202 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms