RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 ACKR3P25106 362 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 CD80P33681 288 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 SEC61A1P61619 476 aaKnown RBP12.43□□□□□ -0.42
ATG4D-207ENST00000587256 IL5RAQ01344 420 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 PRDX4Q13162 271 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 TMED1Q13445 227 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 ZNF404Q494X3 552 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 NLRC3Q7RTR2 1065 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 YIPF7Q8N8F6 280 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 C19orf18Q8NEA5 215 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 FAM71F1Q96KD3 344 aaPredicted RBP12.43□□□□□ -0.42
ATG4D-207ENST00000587256 TMEM246Q9BRR3 403 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 RTL8AQ9BWD3 113 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 ABCB9Q9NP78 766 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 G6PC2Q9NQR9 355 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 GPR84Q9NQS5 396 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 OR5V1Q9UGF6 321 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 LRCH1Q9Y2L9 728 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 MPC1Q9Y5U8 109 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 R4GMQ9 66 aa12.43□□□□□ -0.42
ATG4D-207ENST00000587256 ATRQ13535 2644 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 ZNF816-ZNF321PA0A0X1KG74 233 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 A0A1W2PQL4 384 aaPredicted RBP12.42□□□□□ -0.42
ATG4D-207ENST00000587256 SNTNA6NMZ2 147 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 ZNF850A8MQ14 1090 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 ENTPD6O75354 484 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 RPP14O95059 124 aaKnown RBP12.42□□□□□ -0.42
ATG4D-207ENST00000587256 OR2T7P0C7T2 308 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 MAP2K3P46734 347 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 MEDAGQ5VYS4 303 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 ZNF826PQ6ZT77 177 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 KCTD8Q6ZWB6 473 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 SSX6Q7RTT6 188 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 FAM220AQ7Z4H9 259 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 THAP5Q7Z6K1 395 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 ZDHHC23Q8IYP9 409 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 TEX29Q8N6K0 151 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 DEFB108BQ8NET1 73 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 OR1M1Q8NGA1 313 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 OR8B3Q8NGG8 313 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 OR2T27Q8NH04 317 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 OR51E1Q8TCB6 317 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 PIGCQ92535 297 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 UBE2FQ969M7 185 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 ITPKCQ96DU7 683 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 NEIL1Q96FI4 390 aaPredicted RBP12.42□□□□□ -0.42
ATG4D-207ENST00000587256 OR8B2Q96RD0 313 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 SLC29A1Q99808 456 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 PPP1R3EQ9H7J1 279 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 TMEM165Q9HC07 324 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 MIOXQ9UGB7 285 aa12.42□□□□□ -0.42
ATG4D-207ENST00000587256 MRM2Q9UI43 246 aaKnown RBP12.42□□□□□ -0.42
ATG4D-207ENST00000587256 C3orf80F5H4A9 247 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 J3QLI3 93 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 LGALS8O00214 317 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 PHF1O43189 567 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-207ENST00000587256 FSTL3O95633 263 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 CST4P01036 141 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 GATA3P23771 443 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 ZFP36P26651 326 aaKnown RBP12.41□□□□□ -0.42
ATG4D-207ENST00000587256 MTNR1AP48039 350 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 SNRPGP62308 76 aaKnown RBP12.41□□□□□ -0.42
ATG4D-207ENST00000587256 GNB2P62879 340 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 CSNK2BP67870 215 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 ACTC1P68032 377 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 ACTA1P68133 377 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 HOXA4Q00056 320 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-207ENST00000587256 ZNF154Q13106 437 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 KCNJ8Q15842 424 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 SFRP4Q6FHJ7 346 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-207ENST00000587256 DCDC5Q6ZRR9 648 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 WDR86Q86TI4 376 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 SEMA6DQ8NFY4 1073 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 RNFT2Q96EX2 444 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 HIST1H2AAQ96QV6 131 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 SSBP3Q9BWW4 388 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-207ENST00000587256 METTL17Q9H7H0 456 aaPredicted RBP12.41□□□□□ -0.42
ATG4D-207ENST00000587256 TRIM36Q9NQ86 728 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 OR52A1Q9UKL2 312 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 SNX5Q9Y5X3 404 aa12.41□□□□□ -0.42
ATG4D-207ENST00000587256 LOC105371242A0A075B767 164 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 OOEPA6NGQ2 149 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 METTL15A6NJ78 407 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 A8MXK9 166 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 SRSF10O75494 262 aaKnown RBP12.4□□□□□ -0.42
ATG4D-207ENST00000587256 MTRF1O75570 445 aaKnown RBP12.4□□□□□ -0.42
ATG4D-207ENST00000587256 TTRP02766 147 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 ATP6V1B1P15313 513 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 FAHP16930 419 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 CPT2P23786 658 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 PITPNBP48739 271 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 RCN1Q15293 331 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 OCLNQ16625 522 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 SLC25A30Q5SVS4 291 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 ELMOD2Q8IZ81 293 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 GALNT4Q8N4A0 578 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 GCSAMQ8N6F7 178 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 LRRC29Q8WV35 223 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 HPSE2Q8WWQ2 592 aa12.4□□□□□ -0.42
ATG4D-207ENST00000587256 PPP1R14AQ96A00 147 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms