RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 YAP1P46937 504 aaKnown RBP14.78□□□□□ -0.04
TOP3A-220ENST00000585031 RGS6P49758 472 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 HMGA2P52926 109 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 TAS2R41P59536 307 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 IL18R1Q13478 541 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 AQP6Q13520 282 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 MICAQ29983 383 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 MESTQ5EB52 335 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 KDM4DQ6B0I6 523 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 FAHD1Q6P587 224 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 COLCA1Q6ZS62 124 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 ZNF826PQ6ZT77 177 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 NAA40Q86UY6 237 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 C8orf59Q8N0T1 100 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-220ENST00000585031 LINC00471Q8N535 108 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 LY6G5BQ8NDX9 201 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 OR10G2Q8NGC3 310 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 OR5L1Q8NGL2 311 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 ERGIC1Q969X5 290 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 APOBEC3DQ96AK3 386 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-220ENST00000585031 MED31Q9Y3C7 131 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 KPTNQ9Y664 436 aa14.78□□□□□ -0.04
TOP3A-220ENST00000585031 IGHV3OR15-7A0A075B7D8 119 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 A6NIZ1 184 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 J3QW42 95 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 NPFFO15130 113 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 OR5F1O95221 314 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 IFI30P13284 250 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 DAPP51397 102 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 RAP1BP61224 184 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 RAP1AP62834 184 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 COL10A1Q03692 680 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 GK2Q14410 553 aaPredicted RBP14.77□□□□□ -0.05
TOP3A-220ENST00000585031 OR8B8Q15620 311 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 CRIP3Q6Q6R5 217 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 METAP1DQ6UB28 335 aaPredicted RBP14.77□□□□□ -0.05
TOP3A-220ENST00000585031 SETD9Q8NE22 299 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 TNFRSF14Q92956 283 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 BPIFA2Q96DR5 249 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 AJUBAQ96IF1 538 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 DHRS1Q96LJ7 313 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 PRRC1Q96M27 445 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 Q96M85 177 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 MBOAT4Q96T53 435 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 FNDC11Q9BVV2 318 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 YTHDF1Q9BYJ9 559 aaKnown RBP14.77□□□□□ -0.05
TOP3A-220ENST00000585031 FAM118AQ9NWS6 357 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 MYRFQ9Y2G1 1151 aa14.77□□□□□ -0.05
TOP3A-220ENST00000585031 COA3Q9Y2R0 106 aaPredicted RBP14.77□□□□□ -0.05
TOP3A-220ENST00000585031 TEX13CA0A0J9YWL9 993 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 A0A1B0GVI7 797 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 BTBD17A6NE02 478 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 OOEPA6NGQ2 149 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 J3KTA2 159 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 PPP1R3DO95685 299 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 PTBP3O95758 552 aaKnown RBP14.76□□□□□ -0.05
TOP3A-220ENST00000585031 VSIG10L2P0DP72 767 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 CD28P10747 220 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 PAX6P26367 422 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 HIST1H3AP68431 136 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 LY6EQ16553 131 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 FGD3Q5JSP0 725 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 ZBTB37Q5TC79 503 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 HIST2H3PS2Q5TEC6 136 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 C11orf88Q6PI97 169 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 HIST2H3AQ71DI3 136 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 GCSAMQ8N6F7 178 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 OR52J3Q8NH60 311 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 NPRL2Q8WTW4 380 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 ST8SIA4Q92187 359 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 POLR2J2Q9GZM3 115 aaKnown RBP14.76□□□□□ -0.05
TOP3A-220ENST00000585031 POLR2J3Q9H1A7 115 aaKnown RBP14.76□□□□□ -0.05
TOP3A-220ENST00000585031 RIBC2Q9H4K1 309 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 ONECUT1Q9UBC0 465 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 TENM2Q9NT68 2774 aa14.76□□□□□ -0.05
TOP3A-220ENST00000585031 H3BUX3 64 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 SLC16A6O15403 523 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 IGLL1P15814 213 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 CA6P23280 308 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 SAA4P35542 130 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 GTF2A1P52655 376 aaPredicted RBP14.75□□□□□ -0.05
TOP3A-220ENST00000585031 LSM6P62312 80 aaKnown RBP14.75□□□□□ -0.05
TOP3A-220ENST00000585031 MEP1BQ16820 701 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 KRTAP27-1Q3LI81 207 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 CORO6Q6QEF8 472 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 THAP5Q7Z6K1 395 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 OFCC1Q8IZS5 231 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 OR4S1Q8NGB4 309 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 OR13C2Q8NGS9 318 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 OR5R1Q8NH85 324 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 RORBQ92753 470 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 NMNAT1Q9HAN9 279 aaPredicted RBP14.75□□□□□ -0.05
TOP3A-220ENST00000585031 PAPOLBQ9NRJ5 636 aaKnown RBP14.75□□□□□ -0.05
TOP3A-220ENST00000585031 LHFPL6Q9Y693 200 aa14.75□□□□□ -0.05
TOP3A-220ENST00000585031 TRAV38-1A0A0B4J264 116 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 LOC100130705A0A1B0GUX0 176 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 WI2-2373I1.2A0A1W2PRP0 233 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 A0A1W2PRQ8 180 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 PRSS37A4D1T9 235 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 ECDO95905 644 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms