RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 OR52W1Q6IF63 320 aa12.05□□□□□ -0.48
SRSF1-205ENST00000582730 RAB11FIP2Q7L804 512 aa12.05□□□□□ -0.48
SRSF1-205ENST00000582730 RTN4RL2Q86UN3 420 aa12.05□□□□□ -0.48
SRSF1-205ENST00000582730 CT55Q8WUE5 264 aa12.05□□□□□ -0.48
SRSF1-205ENST00000582730 LIN37Q96GY3 246 aaPredicted RBP12.05□□□□□ -0.48
SRSF1-205ENST00000582730 SRXN1Q9BYN0 137 aa12.05□□□□□ -0.48
SRSF1-205ENST00000582730 BANF2Q9H503 90 aa12.05□□□□□ -0.48
SRSF1-205ENST00000582730 PNRC2Q9NPJ4 139 aaKnown RBP12.05□□□□□ -0.48
SRSF1-205ENST00000582730 MRPS28Q9Y2Q9 187 aaKnown RBP12.05□□□□□ -0.48
SRSF1-205ENST00000582730 TMEM82A0PJX8 343 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 H7C2Y5 167 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 RAB27BO00194 218 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 SULT1C2O00338 296 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 ERCC1P07992 297 aaPredicted RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 RPA2P15927 270 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 OR3A4PP47883 348 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 H3F3AP84243 136 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 C6orf15Q6UXA7 325 aaPredicted RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 TIPARPQ7Z3E1 657 aaKnown RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 PAQR4Q8N4S7 273 aaPredicted RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 TMEM229BQ8NBD8 167 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 NICN1Q9BSH3 213 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 PLEK2Q9NYT0 353 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 UPB1Q9UBR1 384 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 ZMAT5Q9UDW3 170 aaKnown RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 STARP49675 285 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 GRB2P62993 217 aaKnown RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 Q0VFX4 171 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 HIST3H3Q16695 136 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 RAB12Q6IQ22 244 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 DNTTIP1Q9H147 329 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 BARX1Q9HBU1 254 aaPredicted RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 RASL12Q9NYN1 266 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 BPNT1O95861 308 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 RAB6AP20340 208 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 SSBP1Q04837 148 aaKnown RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 RNASE10Q5GAN6 216 aaKnown RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
SRSF1-205ENST00000582730 UQCC2Q9BRT2 126 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 MLXQ9UH92 298 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 RHBDD3Q9Y3P4 386 aa12.04□□□□□ -0.48
SRSF1-205ENST00000582730 A0A0A6YYH2 397 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 A0A1B0GW55 424 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 A0A1W2PP11 408 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 A6NJ64 397 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 E9PLN8 166 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DHHO43323 396 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DBHP09172 617 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DUX4L2P0CJ85 424 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DUX4L3P0CJ86 424 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DUX4L4P0CJ87 422 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DUX4L5P0CJ88 424 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DUX4L6P0CJ89 424 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DUX4L7P0CJ90 424 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 CAPZA1P52907 286 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 RAC1P63000 192 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 TMEM88Q6PEY1 159 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 LYPD6Q86Y78 171 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 BOLLQ8N9W6 283 aaKnown RBP12.03□□□□□ -0.48
SRSF1-205ENST00000582730 TMEM104Q8NE00 496 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 GJC3Q8NFK1 279 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 SGCZQ96LD1 299 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DUX4Q9UBX2 424 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 LOC102725191A0A1B0GVB3 256 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 WIPF3A6NGB9 483 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 B4E171 279 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 VAMP5O95183 116 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 RFPL3SP0C7P2 107 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 ACP1P24666 158 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 TSPAN7P41732 249 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 CXADRP78310 365 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 WIPI1Q5MNZ9 446 aaPredicted RBP12.03□□□□□ -0.48
SRSF1-205ENST00000582730 DOK3Q7L591 496 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 TMEM17Q86X19 198 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 ROBO4Q8WZ75 1007 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 SLC6A7Q99884 636 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 STRADBQ9C0K7 418 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 SLCO5A1Q9H2Y9 848 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 ELL3Q9HB65 397 aaPredicted RBP12.03□□□□□ -0.48
SRSF1-205ENST00000582730 FBXO4Q9UKT5 387 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 KCNK7Q9Y2U2 307 aa12.03□□□□□ -0.48
SRSF1-205ENST00000582730 NCOA6Q14686 2063 aaPredicted RBP12.03□□□□□ -0.48
SRSF1-205ENST00000582730 LINC01387J3KSC0 135 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 CRTAPO75718 401 aaPredicted RBP12.02□□□□□ -0.48
SRSF1-205ENST00000582730 GP1BAP07359 652 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 ZNF84P51523 738 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 ZNF239Q16600 458 aaKnown RBP12.02□□□□□ -0.48
SRSF1-205ENST00000582730 ZNF260Q3ZCT1 412 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 ACER2Q5QJU3 275 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 OR5AS1Q8N127 324 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 BEST3Q8N1M1 668 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 DTWD2Q8NBA8 298 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 CCDC107Q8WV48 283 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 PTX4Q96A99 478 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 WDR13Q9H1Z4 485 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 ESRP2Q9H6T0 727 aaKnown RBP12.02□□□□□ -0.48
SRSF1-205ENST00000582730 P4HTMQ9NXG6 502 aa12.02□□□□□ -0.48
SRSF1-205ENST00000582730 NDRG3Q9UGV2 375 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms