RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 TSPAN4O14817 238 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 CTDSPLO15194 276 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 DHHO43323 396 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GSTZ1O43708 216 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 LMX1BO60663 402 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 MRPL33O75394 65 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 HOXD4P09016 255 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SULT1A3P0DMM9 295 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SULT1A4P0DMN0 295 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ANOS1P23352 680 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 DNASE1P24855 282 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 FAM122CQ6P4D5 195 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 KLHL24Q6TFL4 600 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 FGD2Q7Z6J4 655 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 OR10S1Q8NGN2 331 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 OR2T35Q8NGX2 323 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 THRSPQ92748 146 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 RBPMSQ93062 196 aaKnown RBP11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SLAMF6Q96DU3 332 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 DLL4Q9NR61 685 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SLC7A10Q9NS82 523 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 CA10Q9NS85 328 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 CYB5R1Q9UHQ9 305 aa11.12□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SLC22A20A6NK97 555 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 TAF13Q15543 124 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PRR30Q53SZ7 412 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ZNF585AQ6P3V2 769 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 COMMD2Q86X83 199 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 FAM3DQ96BQ1 224 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ZMAT3Q9HA38 289 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ACACBO00763 2458 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 A0A1B0GVI7 797 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 HRGP04196 525 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 B4GALT1P15291 398 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PRKXP51817 358 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 RAB14P61106 215 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 CEACAM16Q2WEN9 425 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 C2orf76Q3KRA6 126 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GLYATL3Q5SZD4 288 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ASPHD2Q6ICH7 369 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 Q8NA96 180 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 OR2AJ1Q8NGZ0 328 aa11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 DVL3Q92997 716 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GDF2Q9UK05 429 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-217ENST00000580287 TRAV18A0A075B6X5 111 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ATP6V1G2-DDX39BF2Z307 99 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 G3V3Q6 166 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ALDOBP05062 364 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 HSD11B1P28845 292 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 AP3S2P59780 193 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 DYRK1AQ13627 763 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GLT8D1Q68CQ7 371 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 MCEMP1Q8IX19 187 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GPR137CQ8N3F9 429 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 RPRMLQ8N4K4 120 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 UXS1Q8NBZ7 420 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 OR8S1Q8NH09 359 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 NABP1Q96AH0 204 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 WBP1Q96G27 269 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ATG5Q9H1Y0 275 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PPA2Q9H2U2 334 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 C1orf198Q9H425 327 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 G6PC2Q9NQR9 355 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 COPZ2Q9P299 210 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SCP2D1Q9UJQ7 156 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 IGKV3D-15A0A087WSY6 115 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 A0A096LPE4 126 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 A0A1W2PPZ6 126 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SIX6O95475 246 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ECDO95905 644 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SLC2A1P11166 492 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PCK2Q16822 640 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GFOD2Q3B7J2 385 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 OR10K2Q6IF99 312 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 UNQ6494/PRO21346Q6UXR6 183 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ZNF704Q6ZNC4 412 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 FGFBP3Q8TAT2 258 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 RNF133Q8WVZ7 376 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 C7orf50Q9BRJ6 194 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 RDH8Q9NYR8 311 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PRSS50Q9UI38 385 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SLC5A6Q9Y289 635 aa11.1□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PKD1L2Q7Z442 2459 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SLC17A2O00624 439 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 SULT1B1O43704 296 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PSMB1P20618 241 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 HTR2CP28335 458 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 BAMBIQ13145 260 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ENDOGQ14249 297 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 NAA40Q86UY6 237 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 OR56B4Q8NH76 319 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 FGGYQ96C11 551 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 FBXO17Q96EF6 278 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 C1QTNF6Q9BXI9 259 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 GSX2Q9BZM3 304 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 PRDM14Q9GZV8 571 aa11.09□□□□□ -0.63
CDK5RAP3-217ENST00000580287 NOX3Q9HBY0 568 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms