RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SELLP14151 372 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 H2AFXP16104 143 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CRABP1P29762 137 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 GSK3BP49841 420 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 BLCAPP62952 87 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DGCR2P98153 550 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 KCNMB1Q16558 191 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MICBQ29980 383 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TEX36Q5VZQ5 186 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HCP5Q6MZN7 132 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DNM1P34Q6PK57 102 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 UNQ9370/PRO34162Q6UXP9 181 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DPY19L2P2Q6ZN68 376 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PTCHD4Q6ZW05 846 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PGAP1Q75T13 922 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SLC36A1Q7Z2H8 476 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CENPVQ7Z7K6 275 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR5T2Q8NGG2 359 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HDHD2Q9H0R4 259 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 METTL8Q9H825 291 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 EFCAB1Q9HAE3 211 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ADA2Q9NZK5 511 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 RPS6KA6Q9UK32 745 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SIGLEC7Q9Y286 467 aa10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TSSC4Q9Y5U2 329 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-213ENST00000579605 A0A1W2PRQ8 180 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 UNC119BA6NIH7 251 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 H0YAE9 185 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NME4O00746 187 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NDUFAB1O14561 156 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NCK1P16333 377 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CDKN2AP42771 156 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OMPP47874 163 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 GMFBP60983 142 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MALLQ13021 153 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 BLMHQ13867 455 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DGCR6Q14129 220 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 AANATQ16613 207 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MEP1BQ16820 701 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PCK2Q16822 640 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LRRC10Q5BKY1 277 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TCTEX1D4Q5JR98 221 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ADAMTSL5Q6ZMM2 481 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NAA40Q86UY6 237 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LINC00482Q8N8I6 264 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MYDGFQ969H8 173 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DUS3LQ96G46 650 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 KCTD14Q9BQ13 255 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LHFPL6Q9Y693 200 aa10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HUWE1Q7Z6Z7 4374 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-213ENST00000579605 STARD9Q9P2P6 4700 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 F5H5K5 113 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 M0R1W7 72 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 GMDSO60547 372 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CCDC22O60826 627 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SASH3O75995 380 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TXNDC12O95881 172 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 RENP00797 406 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LHBP01229 141 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TFF1P04155 84 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LCATP04180 440 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 RHCEP18577 417 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HIST1H3AP68431 136 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 KRT72Q14CN4 511 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HIST2H3PS2Q5TEC6 136 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CORO6Q6QEF8 472 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SMARCD3Q6STE5 483 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HIST2H3AQ71DI3 136 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MRPL21Q7Z2W9 205 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TSEN54Q7Z6J9 526 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MRPL41Q8IXM3 137 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LNX2Q8N448 690 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PLPP7Q8NBV4 271 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR9Q1Q8NGQ5 310 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LRRC29Q8WV35 223 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DMRTB1Q96MA1 342 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TSSK2Q96PF2 358 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ERMAPQ96PL5 475 aaPredicted RBP10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PRR25Q96S07 402 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PITX2Q99697 317 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SRA1Q9HD15 236 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NDUFAF4Q9P032 175 aa10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NOP16Q9Y3C1 178 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LSM4Q9Y4Z0 139 aaKnown RBP10.62□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CSMD3Q7Z407 3707 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 GGT3PA6NGU5 568 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CD300LBA8K4G0 201 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 F2RL2O00254 374 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 GMNNO75496 209 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PTBP3O95758 552 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MUC1P15941 1255 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NDUFB7P17568 137 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MDH1P40925 334 aaKnown RBP10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NUDT2P50583 147 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LGALS4P56470 323 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 FXYD6P3P58550 94 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SEC23BQ15437 767 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 RSPO1Q2MKA7 263 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SLC36A3Q495N2 470 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms