RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 RANBP3Q9H6Z4 567 aaPredicted RBP8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 ZNF702PQ9H963 129 aa8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 RPRD1BQ9NQG5 326 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 C14orf119Q9NWQ9 140 aa8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 MRPL22Q9NWU5 206 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 ZNF391Q9UJN7 358 aa8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 SF3B6Q9Y3B4 125 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 SACSQ9NZJ4 4579 aa8.21□□□□□ -1.1
NPLOC4-220ENST00000576940 DYNC2H1Q8NCM8 4307 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 A0A1W2PQ09 198 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 FAM220BPB1ANY3 271 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 ZNF682O95780 498 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 TROVE2P10155 538 aaKnown RBP eCLIP8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 NDUFB7P17568 137 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 GRK5P34947 590 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 OMPP47874 163 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 BMXP51813 675 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 PRKXP51817 358 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 ERVFRD-1P60508 538 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 MZT1Q08AG7 82 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 SLC36A3Q495N2 470 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 NCR3LG1Q68D85 454 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 STUMQ69YW2 141 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 Q6ZS46 218 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 CCDC197Q8NCU1 140 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 OR2T12Q8NG77 320 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 RSRC1Q96IZ7 334 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 TMEM120AQ9BXJ8 343 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 METTL8Q9H825 291 aaKnown RBP8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 RAB18Q9NP72 206 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 FGFR1OP2Q9NVK5 253 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 HAO2Q9NYQ3 351 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 SLC25A10Q9UBX3 287 aaPredicted RBP8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 BIRC6Q9NR09 4857 aa8.2□□□□□ -1.1
NPLOC4-220ENST00000576940 A0A1W2PRX2 142 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 OR6C68A6NDL8 312 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 TVP23AA6NH52 213 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 UNC119BA6NIH7 251 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 ANKRD30BLA7E2S9 258 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 H0YAE9 185 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 M0R1W7 72 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 ANGPTL7O43827 346 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 RENP00797 406 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 PSKH1P11801 424 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 HIST1H1CP16403 213 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 NAA10P41227 235 aaPredicted RBP8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 BLMHQ13867 455 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 SEC23BQ15437 767 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 IFI44LQ53G44 452 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 PLA1AQ53H76 456 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 CGB2Q6NT52 195 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 ZNF788Q6ZQV5 615 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 FKBP9P1Q75LS8 142 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 ZBTB46Q86UZ6 589 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 WIPF2Q8TF74 440 aaPredicted RBP8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 ZNRF4Q8WWF5 429 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 SGK3Q96BR1 496 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 C12orf43Q96C57 262 aaKnown RBP8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 GAFA1Q96PS6 74 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 DDOQ99489 341 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 ELL3Q9HB65 397 aaPredicted RBP8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 TMEM5Q9Y2B1 443 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 ARL2BPQ9Y2Y0 163 aa8.19□□□□□ -1.1
NPLOC4-220ENST00000576940 TRBV4-1A0A0J9YWV2 114 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 MRASO14807 208 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 ZNF823P16415 610 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 OTX1P32242 354 aaPredicted RBP8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 PYCR1P32322 319 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 GSK3BP49841 420 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 FAM3AP98173 230 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 CD69Q07108 199 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 AANATQ16613 207 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 SMARCD3Q6STE5 483 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 DRAM2Q6UX65 266 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 CBLL1Q75N03 491 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 SLC16A9Q7RTY1 509 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 MKXQ8IYA7 352 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 DYNAPQ8N1N2 210 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 SDR9C7Q8NEX9 313 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 RPL3LQ92901 407 aaKnown RBP8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 HSH2DQ96JZ2 352 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 CDCA4Q9BXL8 241 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 WNT10AQ9GZT5 417 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 CENPMQ9NSP4 180 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 CMTM6Q9NX76 183 aa8.18□□□□□ -1.1
NPLOC4-220ENST00000576940 TRBV23-1A0A0A0MS06 115 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 A0A0G2JND7 137 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 TBX1O43435 398 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 AKR7A2O43488 359 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 PEX14O75381 377 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 DCTN3O75935 186 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 DIRAS1O95057 198 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 SERPINA1P01009 418 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 NPPAP01160 153 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 H1F0P07305 194 aaKnown RBP8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 ACAA1P09110 424 aaPredicted RBP8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 HOXD3P31249 432 aaPredicted RBP8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 DDOSTP39656 456 aa8.17□□□□□ -1.1
NPLOC4-220ENST00000576940 GABRA2P47869 451 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms