RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CYB5R1Q9UHQ9 305 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 AK3Q9UIJ7 227 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 AMDHD2Q9Y303 409 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 H0YIG0 161 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 NFYBP25208 207 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 RPL19P84098 196 aaKnown RBP16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 SHHQ15465 462 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 SEMA6DQ8NFY4 1073 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 OR5AP2Q8NGF4 316 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 OR51F2Q8NH61 342 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 EMG1Q92979 244 aaKnown RBP16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 KCNIP1Q9NZI2 227 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 RAB27BO00194 218 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 CYR61O00622 381 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 SOCS1O15524 211 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 SCAF4O95104 1147 aaKnown RBP16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 CLDN1O95832 211 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 NGFRP08138 427 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 OR3A4PP47883 348 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 F2RL1P55085 397 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 OR2B11Q5JQS5 317 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF684Q5T5D7 378 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 ZSCAN4Q8NAM6 433 aaPredicted RBP16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 REEP6Q96HR9 211 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 KIRREL1Q96J84 757 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 HS3ST3A1Q9Y663 406 aa16.01■□□□□ 0.15
ATPAF1-214ENST00000576409 ABHD16AO95870 558 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 RAB13P51153 203 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 DCDP81605 110 aaKnown RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 RGP1Q92546 391 aaPredicted RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 VSTM2LQ96N03 204 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 FAM234AQ9H0X4 552 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 CALHM2Q9HA72 323 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 ENY2Q9NPA8 101 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 PARP14Q460N5 1801 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 MRPL33O75394 65 aaKnown RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 CTSBP07858 339 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 HLA-DOBP13765 273 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 RPS15P62841 145 aaKnown RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF239Q16600 458 aaKnown RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 ADAD2Q8NCV1 583 aaKnown RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 OR6K3Q8NGY3 331 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 OR2AE1Q8NHA4 323 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 NPAS1Q99742 590 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 SLC39A9Q9NUM3 307 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 NECAP2Q9NVZ3 263 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 BCAT2O15382 392 aaPredicted RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 SLC35A1P78382 337 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF273Q14593 569 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 INPP5JQ15735 1006 aaPredicted RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF660Q6AZW8 331 aaPredicted RBP16■□□□□ 0.15
ATPAF1-214ENST00000576409 VASH2Q86V25 355 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 SHDQ96IW2 340 aa16■□□□□ 0.15
ATPAF1-214ENST00000576409 RECKO95980 971 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 RAC2P15153 192 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 FIP1L1Q6UN15 594 aaKnown RBP15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 C17orf78Q8N4C9 275 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF784Q8NCA9 323 aaPredicted RBP15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 TTC9Q92623 222 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 MALSU1Q96EH3 234 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 PIGQQ9BRB3 760 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 CHD5Q8TDI0 1954 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 RFC3P40938 356 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 APOBEC1P41238 236 aaKnown RBP15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 IGSF11Q5DX21 431 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 OPN5Q6U736 354 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 C5orf46Q6UWT4 87 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 TRAPPC2LQ9UL33 140 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 CACNA1HO95180 2353 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 TUSC2O75896 110 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 PATE4P0C8F1 98 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 CT45A8P0DMV1 189 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 CT45A9P0DMV2 189 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 GABRG2P18507 467 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 MGAT2Q10469 447 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 ZNF266Q14584 549 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 CT45A2Q5DJT8 189 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 TMEM92Q6UXU6 159 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 AKR7LQ8NHP1 331 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 CMTM3Q96MX0 182 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 IFT22Q9H7X7 185 aa15.99■□□□□ 0.15
ATPAF1-214ENST00000576409 SPTY2D1-AS1A0A0U1RR47 76 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 CTDSPLO15194 276 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 WDR1O75083 606 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 RPS16P62249 146 aaKnown RBP15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 FREM3P0C091 2139 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 A0A087WV48 116 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 A0A096LPE4 126 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 A0A1W2PPZ6 126 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 ZIC2O95409 532 aaPredicted RBP15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 ONECUT2O95948 504 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 SCGB1D1O95968 90 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 PLXDC2Q6UX71 529 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 ASB5Q8WWX0 329 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 LRRC61Q9BV99 259 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 UQCC1Q9NVA1 299 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 CRYBA1P05813 215 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 MSR1P21757 451 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 RBP2P50120 134 aa15.98■□□□□ 0.15
ATPAF1-214ENST00000576409 RRADP55042 308 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms