RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 C1orf123Q9NWV4 160 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 R4GMQ9 66 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 A0A0G2JMP0 313 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 A0A0X1KG70 313 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 A6NLC8 198 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 CEACAM18A8MTB9 384 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 MAGEB4O15481 346 aaPredicted RBP19.71■□□□□ 0.75
SNF8-217ENST00000576353 APOL3O95236 402 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 ACKR3P25106 362 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 ZNF404Q494X3 552 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 FAHD2BQ6P2I3 314 aaPredicted RBP19.71■□□□□ 0.75
SNF8-217ENST00000576353 GALNT4Q8N4A0 578 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 YIPF7Q8N8F6 280 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 OR4M2Q8NGB6 313 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 FAHD2AQ96GK7 314 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 RDH12Q96NR8 316 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 MIOXQ9UGB7 285 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 GTF2A1LQ9UNN4 478 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 SNX5Q9Y5X3 404 aa19.71■□□□□ 0.75
SNF8-217ENST00000576353 LOC100130705A0A1B0GUX0 176 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 F5H0A9 414 aaPredicted RBP19.7■□□□□ 0.74
SNF8-217ENST00000576353 SRSF10O75494 262 aaKnown RBP19.7■□□□□ 0.74
SNF8-217ENST00000576353 SULT1C4O75897 302 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 PNPP00491 289 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 GATA3P23771 443 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 SRP14P37108 136 aaKnown RBP19.7■□□□□ 0.74
SNF8-217ENST00000576353 LCN2P80188 198 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 MFGE8Q08431 387 aaPredicted RBP19.7■□□□□ 0.74
SNF8-217ENST00000576353 PRDX4Q13162 271 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 ESCO2Q56NI9 601 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 FAM201AQ5SY85 155 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 BCL2L15Q5TBC7 163 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 SSX6Q7RTT6 188 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 OR51E1Q8TCB6 317 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 PIGCQ92535 297 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 RNFT2Q96EX2 444 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 TMEM246Q9BRR3 403 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 RTL8AQ9BWD3 113 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 G6PC2Q9NQR9 355 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 GPR84Q9NQS5 396 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 FAM118AQ9NWS6 357 aa19.7■□□□□ 0.74
SNF8-217ENST00000576353 PPIAL4CA0A0B4J2A2 164 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 ZNF816-ZNF321PA0A0X1KG74 233 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 METTL15A6NJ78 407 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 ZNF850A8MQ14 1090 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 J3QLI3 93 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 MTRF1O75570 445 aaKnown RBP19.69■□□□□ 0.74
SNF8-217ENST00000576353 WNT2P09544 360 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 RIPPLY1Q0D2K3 151 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 KCNJ8Q15842 424 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 DCAF12L2Q5VW00 463 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 PLEKHG7Q6ZR37 379 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 KRT74Q7RTS7 529 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 ELMOD2Q8IZ81 293 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 TEX29Q8N6K0 151 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 SEMA6DQ8NFY4 1073 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 OR1M1Q8NGA1 313 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 PPP1R14AQ96A00 147 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 ITPKCQ96DU7 683 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 Q96MT0 163 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 HIST1H2AAQ96QV6 131 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 RNPEPL1Q9HAU8 725 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 TRIM36Q9NQ86 728 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 C8orf4Q9NR00 106 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 SMPD3Q9NY59 655 aaPredicted RBP19.69■□□□□ 0.74
SNF8-217ENST00000576353 OR52A1Q9UKL2 312 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 PCDHGB1Q9Y5G3 927 aa19.69■□□□□ 0.74
SNF8-217ENST00000576353 hCG_1807616A0A1W2PRN6 198 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 SLC16A6O15403 523 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 IGLV3-1P01715 115 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 TTRP02766 147 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 RPS2P15880 293 aaKnown RBP19.68■□□□□ 0.74
SNF8-217ENST00000576353 ZFP36P26651 326 aaKnown RBP19.68■□□□□ 0.74
SNF8-217ENST00000576353 THBS2P35442 1172 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 ACTC1P68032 377 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 ACTA1P68133 377 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 ZNF684Q5T5D7 378 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 ZBTB37Q5TC79 503 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 DCDC5Q6ZRR9 648 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 NLRC3Q7RTR2 1065 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 THAP5Q7Z6K1 395 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 BOLLQ8N9W6 283 aaKnown RBP19.68■□□□□ 0.74
SNF8-217ENST00000576353 ZNF555Q8NEP9 628 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 RHOXF1Q8NHV9 184 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 OR5P3Q8WZ94 311 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 FAM71F1Q96KD3 344 aaPredicted RBP19.68■□□□□ 0.74
SNF8-217ENST00000576353 PPP1R3EQ9H7J1 279 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 LRCH1Q9Y2L9 728 aa19.68■□□□□ 0.74
SNF8-217ENST00000576353 POLR3KQ9Y2Y1 108 aaPredicted RBP19.68■□□□□ 0.74
SNF8-217ENST00000576353 TMEM210A6NLX4 147 aa19.67■□□□□ 0.74
SNF8-217ENST00000576353 KIAA1324LA8MWY0 1029 aaPredicted RBP19.67■□□□□ 0.74
SNF8-217ENST00000576353 LGALS8O00214 317 aa19.67■□□□□ 0.74
SNF8-217ENST00000576353 RPP14O95059 124 aaKnown RBP19.67■□□□□ 0.74
SNF8-217ENST00000576353 GABRB1P18505 474 aa19.67■□□□□ 0.74
SNF8-217ENST00000576353 GABPB1Q06547 395 aaPredicted RBP19.67■□□□□ 0.74
SNF8-217ENST00000576353 ZNF154Q13106 437 aa19.67■□□□□ 0.74
SNF8-217ENST00000576353 RCN1Q15293 331 aa19.67■□□□□ 0.74
SNF8-217ENST00000576353 LIPNQ5VXI9 398 aa19.67■□□□□ 0.74
SNF8-217ENST00000576353 ZNF826PQ6ZT77 177 aa19.67■□□□□ 0.74
SNF8-217ENST00000576353 WDR86Q86TI4 376 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms