RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 B2MP61769 119 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 RAP1AP62834 184 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 HOXA4Q00056 320 aaPredicted RBP4.77□□□□□ -1.65
SMG6-219ENST00000575663 CD83Q01151 205 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 IKZF1Q13422 519 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 SCARB2Q14108 478 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 NKAPLQ5M9Q1 402 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 LRIF1Q5T3J3 769 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 PLBD1Q6P4A8 553 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 C10orf111Q8N326 155 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 GCSAMQ8N6F7 178 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 Q8N7P7 452 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 LINC00482Q8N8I6 264 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 OR5AU1Q8NGC0 362 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 OR5D13Q8NGL4 314 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 OR1F12Q8NHA8 337 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 PFN4Q8NHR9 129 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 TNFRSF14Q92956 283 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 SGTBQ96EQ0 304 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 RCHY1Q96PM5 261 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 ASCL2Q99929 193 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 ZNF426Q9BUY5 554 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 CADM1Q9BY67 442 aaKnown RBP4.77□□□□□ -1.65
SMG6-219ENST00000575663 HDHD2Q9H0R4 259 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 DCLRE1BQ9H816 532 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 WDR76Q9H967 626 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 EMC7Q9NPA0 242 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 INPP5EQ9NRR6 644 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 C1orf123Q9NWV4 160 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 ABCD2Q9UBJ2 740 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 TCF19Q9Y242 345 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 TMEM5Q9Y2B1 443 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 TENM2Q9NT68 2774 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 H0YAE9 185 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 H3BUI4 141 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 IDH3BO43837 385 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 FCN3O75636 299 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 PTBP3O95758 552 aaKnown RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 DBHP09172 617 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 CD247P20963 164 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 CA6P23280 308 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 CHATP28329 748 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 RBM34P42696 430 aaKnown RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 NUDT2P50583 147 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 LGALS4P56470 323 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 PSME3P61289 254 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 ELF3P78545 371 aaPredicted RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 SF3A3Q12874 501 aaKnown RBP eCLIP4.76□□□□□ -1.65
SMG6-219ENST00000575663 TRIM25Q14258 630 aaKnown RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 PCK2Q16822 640 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 WDR38Q5JTN6 314 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 ZFP1Q6P2D0 407 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 FKBP9P1Q75LS8 142 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 PGAP1Q75T13 922 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 MRPL21Q7Z2W9 205 aaKnown RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 DEFB107AQ8IZN7 70 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 FAM216BQ8N7L0 139 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 OR6T1Q8NGN1 323 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 MOSPD2Q8NHP6 518 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 RPS4Y2Q8TD47 263 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 TFAP2CQ92754 450 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 GTF2H4Q92759 462 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 MYDGFQ969H8 173 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 C12orf43Q96C57 262 aaKnown RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 FOXRED1Q96CU9 486 aaPredicted RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 RCN3Q96D15 328 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 ASB9Q96DX5 294 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 DUS3LQ96G46 650 aaKnown RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 TSC22D3Q99576 134 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 CCL13Q99616 98 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 COQ7Q99807 217 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 WFDC6Q9BQY6 131 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 THTPAQ9BU02 230 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 TMEM38AQ9H6F2 299 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 MEPEQ9NQ76 525 aaPredicted RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 C14orf119Q9NWQ9 140 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 CD300AQ9UGN4 299 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 HIF3AQ9Y2N7 669 aa4.76□□□□□ -1.65
SMG6-219ENST00000575663 NUP214P35658 2090 aaPredicted RBP4.76□□□□□ -1.65
SMG6-219ENST00000575663 IGHV3OR15-7A0A075B7D8 119 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 TEX13CA0A0J9YWL9 993 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 A0A1B0GW55 424 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 A0A1W2PPH5 198 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 RBMY1BA6NDE4 496 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 RBMY1EA6NEQ0 496 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 AQP12BA6NM10 295 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 EVPLLA8MZ36 301 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 J3KRW8 73 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 XKRYO14609 159 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 RER1O15258 196 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 GMNNO75496 209 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 GRPP07492 148 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 TSPAN19P0C672 248 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 RBMY1DP0C7P1 496 aaKnown RBP4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4L2P0CJ85 424 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4L3P0CJ86 424 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4L4P0CJ87 422 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4L5P0CJ88 424 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4L6P0CJ89 424 aa4.75□□□□□ -1.65
SMG6-219ENST00000575663 DUX4L7P0CJ90 424 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms